Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm12793-201ENSMUST00000119268 292 ntBASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Gm14629-201ENSMUST00000122428 144 ntBASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 n-R5s45-201ENSMUST00000122592 110 ntBASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Gm22321-201ENSMUST00000157152 104 ntBASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Gm24959-201ENSMUST00000157924 146 ntBASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Gm16545-201ENSMUST00000161968 463 ntBASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Gm24308-201ENSMUST00000177773 114 ntBASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Gm27392-201ENSMUST00000185041 101 ntBASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Gm44337-201ENSMUST00000196553 114 ntBASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Gm40810-201ENSMUST00000219149 253 ntBASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Gm22620-201ENSMUST00000082700 133 ntBASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Nkx6-1Q99MA9 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Gm15714-201ENSMUST00000117168 250 ntBASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Gm14586-201ENSMUST00000119571 408 ntBASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Gm11982-201ENSMUST00000121480 314 ntBASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Gm7618-201ENSMUST00000121643 171 ntBASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Gm22957-201ENSMUST00000122511 123 ntBASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Gm22027-201ENSMUST00000122737 127 ntBASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Gm23713-201ENSMUST00000157353 70 ntBASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Gm23667-201ENSMUST00000157466 120 ntBASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Gm25720-201ENSMUST00000157503 105 ntBASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Gm22615-201ENSMUST00000158102 70 ntBASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Mir7578-201ENSMUST00000183455 82 ntBASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Gm27189-201ENSMUST00000184119 190 ntBASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Gm3829-201ENSMUST00000222362 619 ntBASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 AC115735.2-201ENSMUST00000227135 351 ntBASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Gm22744-201ENSMUST00000083444 65 ntBASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nkx6-1Q99MA9 Gm15304-201ENSMUST00000122150 2640 ntBASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Gm42717-201ENSMUST00000197309 3463 ntBASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Gm22779-201ENSMUST00000104085 107 ntBASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Gm14652-201ENSMUST00000118479 235 ntBASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Gm25436-201ENSMUST00000158275 145 ntBASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Gm26171-201ENSMUST00000158422 131 ntBASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Gm2962-201ENSMUST00000159266 336 ntBASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Gm16303-201ENSMUST00000161498 390 ntBASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Gm16326-201ENSMUST00000162843 414 ntBASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Gm25535-201ENSMUST00000175364 125 ntBASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Gm27718-201ENSMUST00000183721 86 ntBASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Gm27928-201ENSMUST00000183747 256 ntBASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Gm28650-201ENSMUST00000188413 411 ntBASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Gm25200-201ENSMUST00000083094 130 ntBASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Gm22739-201ENSMUST00000083437 160 ntBASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Gm23731-201ENSMUST00000083749 107 ntBASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Hm629797-201ENSMUST00000183645 2398 ntBASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
Nkx6-1Q99MA9 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.77□□□□□ -1.81
Nkx6-1Q99MA9 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Nkx6-1Q99MA9 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Nkx6-1Q99MA9 Gm24121-201ENSMUST00000102029 106 ntBASIC3.77□□□□□ -1.81
Nkx6-1Q99MA9 Gm15926-201ENSMUST00000120492 550 ntBASIC3.77□□□□□ -1.81
Nkx6-1Q99MA9 Gm22036-201ENSMUST00000157279 215 ntBASIC3.77□□□□□ -1.81
Nkx6-1Q99MA9 Gm22225-201ENSMUST00000157358 278 ntBASIC3.77□□□□□ -1.81
Nkx6-1Q99MA9 Gm23540-201ENSMUST00000157543 164 ntBASIC3.77□□□□□ -1.81
Nkx6-1Q99MA9 Gm28020-201ENSMUST00000157739 67 ntBASIC3.77□□□□□ -1.81
Nkx6-1Q99MA9 Gm23640-201ENSMUST00000157860 104 ntBASIC3.77□□□□□ -1.81
Nkx6-1Q99MA9 Gm23666-201ENSMUST00000158053 116 ntBASIC3.77□□□□□ -1.81
Nkx6-1Q99MA9 Gm24392-201ENSMUST00000158136 103 ntBASIC3.77□□□□□ -1.81
Nkx6-1Q99MA9 Gm24006-201ENSMUST00000158462 132 ntBASIC3.77□□□□□ -1.81
Nkx6-1Q99MA9 Gm24667-201ENSMUST00000158938 103 ntBASIC3.77□□□□□ -1.81
Nkx6-1Q99MA9 Gm22450-201ENSMUST00000179641 107 ntBASIC3.77□□□□□ -1.81
Nkx6-1Q99MA9 Gm25473-201ENSMUST00000180191 107 ntBASIC3.77□□□□□ -1.81
Nkx6-1Q99MA9 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.77□□□□□ -1.81
Nkx6-1Q99MA9 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.77□□□□□ -1.81
Nkx6-1Q99MA9 Mir376a-201ENSMUST00000197584 68 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms