Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm13852-201ENSMUST00000122350 242 ntBASIC4.32□□□□□ -1.72
Clp1Q99LI9 Gm22560-201ENSMUST00000157332 120 ntBASIC4.32□□□□□ -1.72
Clp1Q99LI9 Gm23640-201ENSMUST00000157860 104 ntBASIC4.32□□□□□ -1.72
Clp1Q99LI9 Gm22889-201ENSMUST00000158639 58 ntBASIC4.32□□□□□ -1.72
Clp1Q99LI9 Gm22450-201ENSMUST00000179641 107 ntBASIC4.32□□□□□ -1.72
Clp1Q99LI9 Gm25473-201ENSMUST00000180191 107 ntBASIC4.32□□□□□ -1.72
Clp1Q99LI9 Gm30341-201ENSMUST00000194363 289 ntBASIC4.32□□□□□ -1.72
Clp1Q99LI9 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Clp1Q99LI9 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC4.32□□□□□ -1.72
Clp1Q99LI9 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC4.32□□□□□ -1.72
Clp1Q99LI9 Gm44524-201ENSMUST00000203899 271 ntBASIC4.32□□□□□ -1.72
Clp1Q99LI9 Gm44294-201ENSMUST00000205090 728 ntBASIC4.32□□□□□ -1.72
Clp1Q99LI9 Gm44521-201ENSMUST00000206469 217 ntBASIC4.32□□□□□ -1.72
Clp1Q99LI9 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.32□□□□□ -1.72
Clp1Q99LI9 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC4.32□□□□□ -1.72
Clp1Q99LI9 AC166113.1-201ENSMUST00000225258 475 ntBASIC4.32□□□□□ -1.72
Clp1Q99LI9 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Clp1Q99LI9 Gm24856-201ENSMUST00000082809 107 ntBASIC4.32□□□□□ -1.72
Clp1Q99LI9 Gm26071-201ENSMUST00000083261 107 ntBASIC4.32□□□□□ -1.72
Clp1Q99LI9 Mir202-201ENSMUST00000083568 72 ntBASIC4.32□□□□□ -1.72
Clp1Q99LI9 Gm24521-201ENSMUST00000083958 107 ntBASIC4.32□□□□□ -1.72
Clp1Q99LI9 Gm45662-201ENSMUST00000210054 2098 ntBASIC4.32□□□□□ -1.72
Clp1Q99LI9 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Clp1Q99LI9 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Clp1Q99LI9 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Clp1Q99LI9 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Clp1Q99LI9 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.32□□□□□ -1.72
Clp1Q99LI9 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.32□□□□□ -1.72
Clp1Q99LI9 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.32□□□□□ -1.72
Clp1Q99LI9 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Clp1Q99LI9 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.32□□□□□ -1.72
Clp1Q99LI9 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Clp1Q99LI9 Gm42547-201ENSMUST00000201159 3798 ntBASIC4.31□□□□□ -1.72
Clp1Q99LI9 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Clp1Q99LI9 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Clp1Q99LI9 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Clp1Q99LI9 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.31□□□□□ -1.72
Clp1Q99LI9 Gm25764-201ENSMUST00000104092 134 ntBASIC4.31□□□□□ -1.72
Clp1Q99LI9 Mdga2-203ENSMUST00000113942 423 ntBASIC4.31□□□□□ -1.72
Clp1Q99LI9 Gm5396-201ENSMUST00000121222 532 ntBASIC4.31□□□□□ -1.72
Clp1Q99LI9 Gm11645-201ENSMUST00000121589 649 ntBASIC4.31□□□□□ -1.72
Clp1Q99LI9 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.31□□□□□ -1.72
Clp1Q99LI9 Gm24314-201ENSMUST00000158274 123 ntBASIC4.31□□□□□ -1.72
Clp1Q99LI9 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.31□□□□□ -1.72
Clp1Q99LI9 Gm37239-201ENSMUST00000193510 141 ntBASIC4.31□□□□□ -1.72
Clp1Q99LI9 Mir376a-201ENSMUST00000197584 68 ntBASIC4.31□□□□□ -1.72
Clp1Q99LI9 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC4.31□□□□□ -1.72
Clp1Q99LI9 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC4.31□□□□□ -1.72
Clp1Q99LI9 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.31□□□□□ -1.72
Clp1Q99LI9 Gm24356-201ENSMUST00000082859 106 ntBASIC4.31□□□□□ -1.72
Clp1Q99LI9 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.31□□□□□ -1.72
Clp1Q99LI9 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Clp1Q99LI9 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Clp1Q99LI9 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Clp1Q99LI9 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Clp1Q99LI9 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Clp1Q99LI9 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
Clp1Q99LI9 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Clp1Q99LI9 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Clp1Q99LI9 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.3□□□□□ -1.72
Clp1Q99LI9 Gm14020-201ENSMUST00000118165 662 ntBASIC4.3□□□□□ -1.72
Clp1Q99LI9 Gm6574-201ENSMUST00000120037 362 ntBASIC4.3□□□□□ -1.72
Clp1Q99LI9 Gm25805-201ENSMUST00000122788 108 ntBASIC4.3□□□□□ -1.72
Clp1Q99LI9 Gm23982-201ENSMUST00000157141 106 ntBASIC4.3□□□□□ -1.72
Clp1Q99LI9 Gm22320-201ENSMUST00000157149 312 ntBASIC4.3□□□□□ -1.72
Clp1Q99LI9 Gm25720-201ENSMUST00000157503 105 ntBASIC4.3□□□□□ -1.72
Clp1Q99LI9 Gm23540-201ENSMUST00000157543 164 ntBASIC4.3□□□□□ -1.72
Clp1Q99LI9 Gm25428-201ENSMUST00000157608 114 ntBASIC4.3□□□□□ -1.72
Clp1Q99LI9 Gm24392-201ENSMUST00000158136 103 ntBASIC4.3□□□□□ -1.72
Clp1Q99LI9 Gm24667-201ENSMUST00000158938 103 ntBASIC4.3□□□□□ -1.72
Clp1Q99LI9 Mir465d-201ENSMUST00000196314 58 ntBASIC4.3□□□□□ -1.72
Clp1Q99LI9 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.3□□□□□ -1.72
Clp1Q99LI9 AC107757.3-201ENSMUST00000226312 535 ntBASIC4.3□□□□□ -1.72
Clp1Q99LI9 Gm23736-201ENSMUST00000082553 75 ntBASIC4.3□□□□□ -1.72
Clp1Q99LI9 Gm25200-201ENSMUST00000083094 130 ntBASIC4.3□□□□□ -1.72
Clp1Q99LI9 Gm22970-201ENSMUST00000083304 186 ntBASIC4.3□□□□□ -1.72
Clp1Q99LI9 Gm24817-201ENSMUST00000093672 105 ntBASIC4.3□□□□□ -1.72
Clp1Q99LI9 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.3□□□□□ -1.72
Clp1Q99LI9 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Clp1Q99LI9 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Clp1Q99LI9 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Clp1Q99LI9 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Clp1Q99LI9 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Clp1Q99LI9 Gm24096-201ENSMUST00000103905 110 ntBASIC4.29□□□□□ -1.72
Clp1Q99LI9 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.29□□□□□ -1.72
Clp1Q99LI9 Gm23084-201ENSMUST00000157850 114 ntBASIC4.29□□□□□ -1.72
Clp1Q99LI9 Gm24976-201ENSMUST00000158972 135 ntBASIC4.29□□□□□ -1.72
Clp1Q99LI9 Gm26200-201ENSMUST00000180273 79 ntBASIC4.29□□□□□ -1.72
Clp1Q99LI9 Mir6540-201ENSMUST00000184886 108 ntBASIC4.29□□□□□ -1.72
Clp1Q99LI9 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.29□□□□□ -1.72
Clp1Q99LI9 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC4.29□□□□□ -1.72
Clp1Q99LI9 AC135292.1-201ENSMUST00000227665 204 ntBASIC4.29□□□□□ -1.72
Clp1Q99LI9 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Clp1Q99LI9 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.29□□□□□ -1.72
Clp1Q99LI9 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Clp1Q99LI9 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Clp1Q99LI9 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Clp1Q99LI9 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Clp1Q99LI9 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Clp1Q99LI9 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms