Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ushbp1Q8R370 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.78□□□□□ -1.8
Ushbp1Q8R370 Gm24118-201ENSMUST00000103972 126 ntBASIC3.78□□□□□ -1.8
Ushbp1Q8R370 Gm14296-202ENSMUST00000108931 750 ntBASIC3.78□□□□□ -1.8
Ushbp1Q8R370 Gm14768-201ENSMUST00000122126 678 ntBASIC3.78□□□□□ -1.8
Ushbp1Q8R370 Gm25220-201ENSMUST00000157546 95 ntBASIC3.78□□□□□ -1.8
Ushbp1Q8R370 Gm26414-201ENSMUST00000157674 269 ntBASIC3.78□□□□□ -1.8
Ushbp1Q8R370 Gm22766-201ENSMUST00000158372 99 ntBASIC3.78□□□□□ -1.8
Ushbp1Q8R370 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC3.78□□□□□ -1.8
Ushbp1Q8R370 Gm26400-201ENSMUST00000175012 85 ntBASIC3.78□□□□□ -1.8
Ushbp1Q8R370 Gm26426-201ENSMUST00000177866 123 ntBASIC3.78□□□□□ -1.8
Ushbp1Q8R370 Gm22263-201ENSMUST00000180060 104 ntBASIC3.78□□□□□ -1.8
Ushbp1Q8R370 Gm26060-201ENSMUST00000180094 123 ntBASIC3.78□□□□□ -1.8
Ushbp1Q8R370 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.78□□□□□ -1.8
Ushbp1Q8R370 Gm36891-201ENSMUST00000191995 655 ntBASIC3.78□□□□□ -1.8
Ushbp1Q8R370 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.78□□□□□ -1.8
Ushbp1Q8R370 Gm7948-201ENSMUST00000212607 844 ntBASIC3.78□□□□□ -1.8
Ushbp1Q8R370 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.78□□□□□ -1.8
Ushbp1Q8R370 Gm4987-201ENSMUST00000078326 408 ntBASIC3.78□□□□□ -1.8
Ushbp1Q8R370 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ushbp1Q8R370 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Ushbp1Q8R370 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Ushbp1Q8R370 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.78□□□□□ -1.8
Ushbp1Q8R370 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Ushbp1Q8R370 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.77□□□□□ -1.81
Ushbp1Q8R370 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ushbp1Q8R370 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
Ushbp1Q8R370 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.77□□□□□ -1.81
Ushbp1Q8R370 Gm26020-201ENSMUST00000122729 183 ntBASIC3.77□□□□□ -1.81
Ushbp1Q8R370 Gm8580-201ENSMUST00000160295 464 ntBASIC3.77□□□□□ -1.81
Ushbp1Q8R370 Mir3092-201ENSMUST00000174954 96 ntBASIC3.77□□□□□ -1.81
Ushbp1Q8R370 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.77□□□□□ -1.81
Ushbp1Q8R370 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.77□□□□□ -1.81
Ushbp1Q8R370 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.77□□□□□ -1.81
Ushbp1Q8R370 Gm19202-201ENSMUST00000198096 808 ntBASIC3.77□□□□□ -1.81
Ushbp1Q8R370 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Ushbp1Q8R370 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC3.77□□□□□ -1.81
Ushbp1Q8R370 Gm6842-201ENSMUST00000211361 390 ntBASIC3.77□□□□□ -1.81
Ushbp1Q8R370 Gm18921-201ENSMUST00000221798 366 ntBASIC3.77□□□□□ -1.81
Ushbp1Q8R370 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Ushbp1Q8R370 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.77□□□□□ -1.81
Ushbp1Q8R370 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
Ushbp1Q8R370 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Gm23941-201ENSMUST00000101953 107 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Gm24068-201ENSMUST00000104513 132 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Gm12025-201ENSMUST00000117768 144 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Gm12876-201ENSMUST00000120975 408 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Gm24936-201ENSMUST00000122598 247 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Gm24959-201ENSMUST00000157924 146 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Gm8114-201ENSMUST00000172225 484 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Gm26501-201ENSMUST00000178307 107 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Gm24862-201ENSMUST00000179103 79 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Gm23310-201ENSMUST00000179105 79 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Gm25461-201ENSMUST00000179293 79 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Gm18486-201ENSMUST00000184040 298 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Mir6335-201ENSMUST00000184081 98 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Gm43402-201ENSMUST00000197159 159 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.76□□□□□ -1.81
Ushbp1Q8R370 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Gm22507-201ENSMUST00000082773 160 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.76□□□□□ -1.81
Ushbp1Q8R370 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC3.75□□□□□ -1.81
Ushbp1Q8R370 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ushbp1Q8R370 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm13876-201ENSMUST00000118451 261 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm24596-201ENSMUST00000122504 107 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm24839-201ENSMUST00000122602 107 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm26027-201ENSMUST00000122725 268 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm26275-201ENSMUST00000157101 268 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm23137-201ENSMUST00000157559 107 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm24584-201ENSMUST00000157972 107 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm25211-201ENSMUST00000177553 107 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm24540-201ENSMUST00000177627 107 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm25256-201ENSMUST00000177746 107 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm22822-201ENSMUST00000177941 107 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Rnu6-201ENSMUST00000178023 107 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm23151-201ENSMUST00000178061 107 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm23402-201ENSMUST00000178130 107 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm25245-201ENSMUST00000178139 107 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm24753-201ENSMUST00000178183 107 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm25829-201ENSMUST00000178275 107 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm22092-201ENSMUST00000178290 107 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm24486-201ENSMUST00000178420 107 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm23217-201ENSMUST00000178482 107 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm26245-201ENSMUST00000178491 107 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm24019-201ENSMUST00000178620 107 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm23610-201ENSMUST00000178659 107 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm23141-201ENSMUST00000178682 94 ntBASIC3.75□□□□□ -1.81
Ushbp1Q8R370 Gm23092-201ENSMUST00000178688 107 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms