Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm28951-201ENSMUST00000190742 313 ntBASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Gm43899-201ENSMUST00000203675 246 ntBASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Gm44266-201ENSMUST00000205235 500 ntBASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Gm45344-201ENSMUST00000211610 341 ntBASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.69□□□□□ -1.82
Vps53Q8CCB4 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Gm25207-201ENSMUST00000093745 107 ntBASIC3.69□□□□□ -1.82
Vps53Q8CCB4 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Vps53Q8CCB4 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Vps53Q8CCB4 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Vps53Q8CCB4 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Vps53Q8CCB4 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Vps53Q8CCB4 Gm12954-201ENSMUST00000118610 611 ntBASIC3.68□□□□□ -1.82
Vps53Q8CCB4 Gm23214-201ENSMUST00000122716 157 ntBASIC3.68□□□□□ -1.82
Vps53Q8CCB4 Gm16358-201ENSMUST00000146046 210 ntBASIC3.68□□□□□ -1.82
Vps53Q8CCB4 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC3.68□□□□□ -1.82
Vps53Q8CCB4 Gm24191-201ENSMUST00000157977 122 ntBASIC3.68□□□□□ -1.82
Vps53Q8CCB4 Gm25373-201ENSMUST00000158156 115 ntBASIC3.68□□□□□ -1.82
Vps53Q8CCB4 Gm22668-201ENSMUST00000158716 260 ntBASIC3.68□□□□□ -1.82
Vps53Q8CCB4 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.68□□□□□ -1.82
Vps53Q8CCB4 Gm23977-201ENSMUST00000177871 74 ntBASIC3.68□□□□□ -1.82
Vps53Q8CCB4 Gm27624-201ENSMUST00000185047 177 ntBASIC3.68□□□□□ -1.82
Vps53Q8CCB4 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Vps53Q8CCB4 Gm20923-201ENSMUST00000190009 319 ntBASIC3.68□□□□□ -1.82
Vps53Q8CCB4 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC3.68□□□□□ -1.82
Vps53Q8CCB4 Gm44964-201ENSMUST00000207011 273 ntBASIC3.68□□□□□ -1.82
Vps53Q8CCB4 Gm45380-201ENSMUST00000210465 315 ntBASIC3.68□□□□□ -1.82
Vps53Q8CCB4 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Vps53Q8CCB4 Gm22061-201ENSMUST00000082557 107 ntBASIC3.68□□□□□ -1.82
Vps53Q8CCB4 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Vps53Q8CCB4 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC3.67□□□□□ -1.82
Vps53Q8CCB4 Gm13518-201ENSMUST00000120018 233 ntBASIC3.67□□□□□ -1.82
Vps53Q8CCB4 Gm15190-201ENSMUST00000120855 276 ntBASIC3.67□□□□□ -1.82
Vps53Q8CCB4 Gm15733-201ENSMUST00000132957 242 ntBASIC3.67□□□□□ -1.82
Vps53Q8CCB4 Gm26102-201ENSMUST00000157251 284 ntBASIC3.67□□□□□ -1.82
Vps53Q8CCB4 Gm22843-201ENSMUST00000157710 134 ntBASIC3.67□□□□□ -1.82
Vps53Q8CCB4 Gm22435-201ENSMUST00000158552 128 ntBASIC3.67□□□□□ -1.82
Vps53Q8CCB4 Gm20672-201ENSMUST00000176605 261 ntBASIC3.67□□□□□ -1.82
Vps53Q8CCB4 Gm28995-201ENSMUST00000186625 261 ntBASIC3.67□□□□□ -1.82
Vps53Q8CCB4 Gm7837-201ENSMUST00000190873 412 ntBASIC3.67□□□□□ -1.82
Vps53Q8CCB4 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.67□□□□□ -1.82
Vps53Q8CCB4 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.67□□□□□ -1.82
Vps53Q8CCB4 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.67□□□□□ -1.82
Vps53Q8CCB4 Gm23406-201ENSMUST00000082537 122 ntBASIC3.67□□□□□ -1.82
Vps53Q8CCB4 Gm25801-201ENSMUST00000082638 106 ntBASIC3.67□□□□□ -1.82
Vps53Q8CCB4 Gm22154-201ENSMUST00000083844 131 ntBASIC3.67□□□□□ -1.82
Vps53Q8CCB4 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.67□□□□□ -1.82
Vps53Q8CCB4 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.67□□□□□ -1.82
Vps53Q8CCB4 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Vps53Q8CCB4 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Vps53Q8CCB4 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Vps53Q8CCB4 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Vps53Q8CCB4 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.66□□□□□ -1.82
Vps53Q8CCB4 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.66□□□□□ -1.82
Vps53Q8CCB4 Gm11384-201ENSMUST00000121376 303 ntBASIC3.66□□□□□ -1.82
Vps53Q8CCB4 Gm22675-201ENSMUST00000158430 104 ntBASIC3.66□□□□□ -1.82
Vps53Q8CCB4 Mir5624-201ENSMUST00000176635 61 ntBASIC3.66□□□□□ -1.82
Vps53Q8CCB4 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.66□□□□□ -1.82
Vps53Q8CCB4 Gm25198-201ENSMUST00000178574 110 ntBASIC3.66□□□□□ -1.82
Vps53Q8CCB4 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC3.66□□□□□ -1.82
Vps53Q8CCB4 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.66□□□□□ -1.82
Vps53Q8CCB4 Gm25203-202ENSMUST00000200458 216 ntBASIC3.66□□□□□ -1.82
Vps53Q8CCB4 Gm19244-201ENSMUST00000204340 253 ntBASIC3.66□□□□□ -1.82
Vps53Q8CCB4 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.66□□□□□ -1.82
Vps53Q8CCB4 AC163357.1-201ENSMUST00000220847 233 ntBASIC3.66□□□□□ -1.82
Vps53Q8CCB4 Gm25203-201ENSMUST00000082842 215 ntBASIC3.66□□□□□ -1.82
Vps53Q8CCB4 Gm25411-201ENSMUST00000083760 151 ntBASIC3.66□□□□□ -1.82
Vps53Q8CCB4 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC3.66□□□□□ -1.82
Vps53Q8CCB4 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.66□□□□□ -1.82
Vps53Q8CCB4 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.66□□□□□ -1.82
Vps53Q8CCB4 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Vps53Q8CCB4 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Vps53Q8CCB4 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Vps53Q8CCB4 Gm24119-201ENSMUST00000103979 246 ntBASIC3.65□□□□□ -1.83
Vps53Q8CCB4 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Vps53Q8CCB4 Gm13717-201ENSMUST00000119868 365 ntBASIC3.65□□□□□ -1.83
Vps53Q8CCB4 Gm16021-201ENSMUST00000121176 219 ntBASIC3.65□□□□□ -1.83
Vps53Q8CCB4 Gm12924-201ENSMUST00000121747 318 ntBASIC3.65□□□□□ -1.83
Vps53Q8CCB4 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC3.65□□□□□ -1.83
Vps53Q8CCB4 Gm23380-201ENSMUST00000158448 103 ntBASIC3.65□□□□□ -1.83
Vps53Q8CCB4 Gm15914-201ENSMUST00000161922 309 ntBASIC3.65□□□□□ -1.83
Vps53Q8CCB4 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Vps53Q8CCB4 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC3.65□□□□□ -1.83
Vps53Q8CCB4 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC3.65□□□□□ -1.83
Vps53Q8CCB4 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.65□□□□□ -1.83
Vps53Q8CCB4 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC3.65□□□□□ -1.83
Vps53Q8CCB4 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.65□□□□□ -1.83
Vps53Q8CCB4 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.65□□□□□ -1.83
Vps53Q8CCB4 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.65□□□□□ -1.83
Vps53Q8CCB4 Gm22249-201ENSMUST00000082485 136 ntBASIC3.65□□□□□ -1.83
Vps53Q8CCB4 Gm24522-201ENSMUST00000083964 108 ntBASIC3.65□□□□□ -1.83
Vps53Q8CCB4 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Vps53Q8CCB4 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 98.4 ms