Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm6395-201ENSMUST00000167639 691 ntBASIC1.55□□□□□ -2.16
Trub1Q8C0D0 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.55□□□□□ -2.16
Trub1Q8C0D0 Gm38238-201ENSMUST00000194334 346 ntBASIC1.55□□□□□ -2.16
Trub1Q8C0D0 Gm23370-202ENSMUST00000197008 129 ntBASIC1.55□□□□□ -2.16
Trub1Q8C0D0 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC1.55□□□□□ -2.16
Trub1Q8C0D0 Gm44524-201ENSMUST00000203899 271 ntBASIC1.55□□□□□ -2.16
Trub1Q8C0D0 Gm44961-201ENSMUST00000207450 196 ntBASIC1.55□□□□□ -2.16
Trub1Q8C0D0 AC152951.1-201ENSMUST00000218907 266 ntBASIC1.55□□□□□ -2.16
Trub1Q8C0D0 Gm22974-201ENSMUST00000083301 103 ntBASIC1.55□□□□□ -2.16
Trub1Q8C0D0 Gm45461-201ENSMUST00000211726 4535 ntBASIC1.55□□□□□ -2.16
Trub1Q8C0D0 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.54□□□□□ -2.16
Trub1Q8C0D0 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Trub1Q8C0D0 Gm22496-201ENSMUST00000104493 88 ntBASIC1.54□□□□□ -2.16
Trub1Q8C0D0 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.54□□□□□ -2.16
Trub1Q8C0D0 Gm14770-201ENSMUST00000122197 312 ntBASIC1.54□□□□□ -2.16
Trub1Q8C0D0 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
Trub1Q8C0D0 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC1.54□□□□□ -2.16
Trub1Q8C0D0 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.54□□□□□ -2.16
Trub1Q8C0D0 Gm25175-201ENSMUST00000178712 79 ntBASIC1.54□□□□□ -2.16
Trub1Q8C0D0 Mir7017-201ENSMUST00000184894 62 ntBASIC1.54□□□□□ -2.16
Trub1Q8C0D0 Gm5329-201ENSMUST00000186898 463 ntBASIC1.54□□□□□ -2.16
Trub1Q8C0D0 Gm29657-201ENSMUST00000189807 342 ntBASIC1.54□□□□□ -2.16
Trub1Q8C0D0 Gm38044-201ENSMUST00000192964 487 ntBASIC1.54□□□□□ -2.16
Trub1Q8C0D0 Gm8747-201ENSMUST00000195392 751 ntBASIC1.54□□□□□ -2.16
Trub1Q8C0D0 Gm33354-201ENSMUST00000195448 906 ntBASIC1.54□□□□□ -2.16
Trub1Q8C0D0 Gm18991-201ENSMUST00000209225 746 ntBASIC1.54□□□□□ -2.16
Trub1Q8C0D0 Gm19709-201ENSMUST00000215403 482 ntBASIC1.54□□□□□ -2.16
Trub1Q8C0D0 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.54□□□□□ -2.16
Trub1Q8C0D0 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.54□□□□□ -2.16
Trub1Q8C0D0 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.54□□□□□ -2.16
Trub1Q8C0D0 Gm22265-201ENSMUST00000082947 116 ntBASIC1.54□□□□□ -2.16
Trub1Q8C0D0 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Trub1Q8C0D0 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Trub1Q8C0D0 Gm22713-201ENSMUST00000116895 130 ntBASIC1.53□□□□□ -2.16
Trub1Q8C0D0 Gm15183-201ENSMUST00000118933 348 ntBASIC1.53□□□□□ -2.16
Trub1Q8C0D0 Gm23048-201ENSMUST00000157237 129 ntBASIC1.53□□□□□ -2.16
Trub1Q8C0D0 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.53□□□□□ -2.16
Trub1Q8C0D0 Gm23558-201ENSMUST00000157823 80 ntBASIC1.53□□□□□ -2.16
Trub1Q8C0D0 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Trub1Q8C0D0 Gm17062-201ENSMUST00000166987 461 ntBASIC1.53□□□□□ -2.16
Trub1Q8C0D0 Gm21827-201ENSMUST00000178247 423 ntBASIC1.53□□□□□ -2.16
Trub1Q8C0D0 Gm28000-201ENSMUST00000184380 85 ntBASIC1.53□□□□□ -2.16
Trub1Q8C0D0 Mir6376-201ENSMUST00000185149 131 ntBASIC1.53□□□□□ -2.16
Trub1Q8C0D0 Gm37029-201ENSMUST00000195773 239 ntBASIC1.53□□□□□ -2.16
Trub1Q8C0D0 Gm42672-201ENSMUST00000197821 352 ntBASIC1.53□□□□□ -2.16
Trub1Q8C0D0 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Trub1Q8C0D0 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.53□□□□□ -2.16
Trub1Q8C0D0 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC1.53□□□□□ -2.16
Trub1Q8C0D0 Gm18617-201ENSMUST00000222311 259 ntBASIC1.53□□□□□ -2.16
Trub1Q8C0D0 Mir300-201ENSMUST00000083485 79 ntBASIC1.53□□□□□ -2.16
Trub1Q8C0D0 Gm23040-201ENSMUST00000083869 163 ntBASIC1.53□□□□□ -2.16
Trub1Q8C0D0 Gm16261-201ENSMUST00000096813 205 ntBASIC1.53□□□□□ -2.16
Trub1Q8C0D0 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Trub1Q8C0D0 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
Trub1Q8C0D0 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm37630-201ENSMUST00000194210 1456 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Mir873a-201ENSMUST00000104863 77 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm15177-201ENSMUST00000120491 577 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm14049-201ENSMUST00000121009 636 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm2768-201ENSMUST00000121062 250 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm25624-201ENSMUST00000157222 275 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm22186-201ENSMUST00000157822 122 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm21744-201ENSMUST00000178403 662 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm21171-201ENSMUST00000180048 673 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm11395-201ENSMUST00000181011 499 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm29413-201ENSMUST00000186019 880 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm28700-201ENSMUST00000187614 579 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm29639-201ENSMUST00000188375 580 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm28843-201ENSMUST00000189198 678 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm29546-201ENSMUST00000191171 678 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm43578-201ENSMUST00000201250 459 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm44962-201ENSMUST00000206460 279 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm44554-201ENSMUST00000208738 147 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm44548-201ENSMUST00000208929 192 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm45636-201ENSMUST00000210497 1064 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 AC122225.1-201ENSMUST00000215641 369 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 AC141642.1-201ENSMUST00000220598 229 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 AC131085.1-201ENSMUST00000224746 656 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm22443-201ENSMUST00000082890 107 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm26327-201ENSMUST00000093724 111 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm44821-201ENSMUST00000208212 2002 ntBASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Trub1Q8C0D0 Gm14445-201ENSMUST00000117051 1484 ntBASIC1.51□□□□□ -2.17
Trub1Q8C0D0 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
Trub1Q8C0D0 Gm22779-201ENSMUST00000104085 107 ntBASIC1.51□□□□□ -2.17
Trub1Q8C0D0 Gm14931-201ENSMUST00000111079 253 ntBASIC1.51□□□□□ -2.17
Trub1Q8C0D0 Gm14932-201ENSMUST00000117112 453 ntBASIC1.51□□□□□ -2.17
Trub1Q8C0D0 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.51□□□□□ -2.17
Trub1Q8C0D0 Gm12765-201ENSMUST00000117273 615 ntBASIC1.51□□□□□ -2.17
Trub1Q8C0D0 Gm14868-201ENSMUST00000117840 216 ntBASIC1.51□□□□□ -2.17
Trub1Q8C0D0 Gm12191-201ENSMUST00000118307 348 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms