Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Mir465b-2-201ENSMUST00000104662 79 ntBASIC4.34□□□□□ -1.71
Trim56Q80VI1 Gm15846-201ENSMUST00000116022 320 ntBASIC4.34□□□□□ -1.71
Trim56Q80VI1 Gm13729-201ENSMUST00000120328 406 ntBASIC4.34□□□□□ -1.71
Trim56Q80VI1 Gm22107-201ENSMUST00000122548 100 ntBASIC4.34□□□□□ -1.71
Trim56Q80VI1 Gm10075-201ENSMUST00000162030 545 ntBASIC4.34□□□□□ -1.71
Trim56Q80VI1 Gm20651-201ENSMUST00000177219 329 ntBASIC4.34□□□□□ -1.71
Trim56Q80VI1 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC4.34□□□□□ -1.71
Trim56Q80VI1 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC4.34□□□□□ -1.71
Trim56Q80VI1 Gm44533-201ENSMUST00000207782 268 ntBASIC4.34□□□□□ -1.71
Trim56Q80VI1 Gm35857-201ENSMUST00000212739 178 ntBASIC4.34□□□□□ -1.71
Trim56Q80VI1 AC159709.1-201ENSMUST00000220445 349 ntBASIC4.34□□□□□ -1.71
Trim56Q80VI1 Gm23454-201ENSMUST00000083332 133 ntBASIC4.34□□□□□ -1.71
Trim56Q80VI1 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Trim56Q80VI1 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.34□□□□□ -1.72
Trim56Q80VI1 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.72
Trim56Q80VI1 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim56Q80VI1 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim56Q80VI1 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.33□□□□□ -1.72
Trim56Q80VI1 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Trim56Q80VI1 Gm22984-201ENSMUST00000122751 122 ntBASIC4.33□□□□□ -1.72
Trim56Q80VI1 Gm23585-201ENSMUST00000157656 102 ntBASIC4.33□□□□□ -1.72
Trim56Q80VI1 Gm26928-201ENSMUST00000182674 572 ntBASIC4.33□□□□□ -1.72
Trim56Q80VI1 Ighv1-46-201ENSMUST00000193988 351 ntBASIC4.33□□□□□ -1.72
Trim56Q80VI1 Gm6105-201ENSMUST00000200580 624 ntBASIC4.33□□□□□ -1.72
Trim56Q80VI1 AC105958.2-201ENSMUST00000214167 191 ntBASIC4.33□□□□□ -1.72
Trim56Q80VI1 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.33□□□□□ -1.72
Trim56Q80VI1 Gm25480-201ENSMUST00000083217 133 ntBASIC4.33□□□□□ -1.72
Trim56Q80VI1 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trim56Q80VI1 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim56Q80VI1 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim56Q80VI1 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.33□□□□□ -1.72
Trim56Q80VI1 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Trim56Q80VI1 Gm37672-201ENSMUST00000192682 4014 ntBASIC4.32□□□□□ -1.72
Trim56Q80VI1 Gm24544-201ENSMUST00000103862 110 ntBASIC4.32□□□□□ -1.72
Trim56Q80VI1 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC4.32□□□□□ -1.72
Trim56Q80VI1 Gm25392-201ENSMUST00000157335 297 ntBASIC4.32□□□□□ -1.72
Trim56Q80VI1 Gm22310-201ENSMUST00000157509 116 ntBASIC4.32□□□□□ -1.72
Trim56Q80VI1 Gm22766-201ENSMUST00000158372 99 ntBASIC4.32□□□□□ -1.72
Trim56Q80VI1 Gm2962-201ENSMUST00000159266 336 ntBASIC4.32□□□□□ -1.72
Trim56Q80VI1 Mir6938-201ENSMUST00000184173 63 ntBASIC4.32□□□□□ -1.72
Trim56Q80VI1 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.32□□□□□ -1.72
Trim56Q80VI1 Gm43402-201ENSMUST00000197159 159 ntBASIC4.32□□□□□ -1.72
Trim56Q80VI1 Gm44519-201ENSMUST00000206486 122 ntBASIC4.32□□□□□ -1.72
Trim56Q80VI1 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.32□□□□□ -1.72
Trim56Q80VI1 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.32□□□□□ -1.72
Trim56Q80VI1 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC4.32□□□□□ -1.72
Trim56Q80VI1 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim56Q80VI1 Gm22062-201ENSMUST00000082563 107 ntBASIC4.32□□□□□ -1.72
Trim56Q80VI1 Mir181b-2-201ENSMUST00000083644 89 ntBASIC4.32□□□□□ -1.72
Trim56Q80VI1 Gm25896-201ENSMUST00000083713 136 ntBASIC4.32□□□□□ -1.72
Trim56Q80VI1 Snord15a-201ENSMUST00000083888 148 ntBASIC4.32□□□□□ -1.72
Trim56Q80VI1 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim56Q80VI1 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trim56Q80VI1 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trim56Q80VI1 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Trim56Q80VI1 Gm37941-201ENSMUST00000192170 2309 ntBASIC4.32□□□□□ -1.72
Trim56Q80VI1 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trim56Q80VI1 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.31□□□□□ -1.72
Trim56Q80VI1 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trim56Q80VI1 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trim56Q80VI1 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.31□□□□□ -1.72
Trim56Q80VI1 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trim56Q80VI1 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trim56Q80VI1 Gm23257-201ENSMUST00000158322 132 ntBASIC4.31□□□□□ -1.72
Trim56Q80VI1 Gm25654-201ENSMUST00000158467 88 ntBASIC4.31□□□□□ -1.72
Trim56Q80VI1 Gm22890-201ENSMUST00000158642 144 ntBASIC4.31□□□□□ -1.72
Trim56Q80VI1 Gm23196-201ENSMUST00000158806 107 ntBASIC4.31□□□□□ -1.72
Trim56Q80VI1 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC4.31□□□□□ -1.72
Trim56Q80VI1 Gm44294-201ENSMUST00000205090 728 ntBASIC4.31□□□□□ -1.72
Trim56Q80VI1 Gm9818-201ENSMUST00000050900 255 ntBASIC4.31□□□□□ -1.72
Trim56Q80VI1 Mir471-201ENSMUST00000093596 67 ntBASIC4.31□□□□□ -1.72
Trim56Q80VI1 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
Trim56Q80VI1 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trim56Q80VI1 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trim56Q80VI1 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trim56Q80VI1 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Trim56Q80VI1 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Trim56Q80VI1 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Trim56Q80VI1 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Trim56Q80VI1 Gm24121-201ENSMUST00000102029 106 ntBASIC4.3□□□□□ -1.72
Trim56Q80VI1 Gm13714-201ENSMUST00000117313 221 ntBASIC4.3□□□□□ -1.72
Trim56Q80VI1 Gm11704-201ENSMUST00000120031 214 ntBASIC4.3□□□□□ -1.72
Trim56Q80VI1 Gm25105-201ENSMUST00000122477 130 ntBASIC4.3□□□□□ -1.72
Trim56Q80VI1 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.3□□□□□ -1.72
Trim56Q80VI1 Gm22320-201ENSMUST00000157149 312 ntBASIC4.3□□□□□ -1.72
Trim56Q80VI1 Gm24001-201ENSMUST00000158463 85 ntBASIC4.3□□□□□ -1.72
Trim56Q80VI1 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Trim56Q80VI1 Gm20542-201ENSMUST00000174582 372 ntBASIC4.3□□□□□ -1.72
Trim56Q80VI1 Spin2g-201ENSMUST00000178425 687 ntBASIC4.3□□□□□ -1.72
Trim56Q80VI1 Gm7329-201ENSMUST00000185915 210 ntBASIC4.3□□□□□ -1.72
Trim56Q80VI1 Gm37417-201ENSMUST00000195257 454 ntBASIC4.3□□□□□ -1.72
Trim56Q80VI1 Gm45031-201ENSMUST00000206800 288 ntBASIC4.3□□□□□ -1.72
Trim56Q80VI1 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC4.3□□□□□ -1.72
Trim56Q80VI1 Gm19790-201ENSMUST00000214414 251 ntBASIC4.3□□□□□ -1.72
Trim56Q80VI1 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC4.3□□□□□ -1.72
Trim56Q80VI1 AC113031.4-201ENSMUST00000228381 514 ntBASIC4.3□□□□□ -1.72
Trim56Q80VI1 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trim56Q80VI1 Gm23736-201ENSMUST00000082553 75 ntBASIC4.3□□□□□ -1.72
Trim56Q80VI1 Gm23517-201ENSMUST00000082830 192 ntBASIC4.3□□□□□ -1.72
Trim56Q80VI1 Mir133a-1-201ENSMUST00000083465 68 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms