Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Mir1a-2-201ENSMUST00000198520 72 ntBASIC4.12□□□□□ -1.75
Pcdh19Q80TF3 Gm35702-201ENSMUST00000198653 511 ntBASIC4.12□□□□□ -1.75
Pcdh19Q80TF3 Snord80-202ENSMUST00000199023 77 ntBASIC4.12□□□□□ -1.75
Pcdh19Q80TF3 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.12□□□□□ -1.75
Pcdh19Q80TF3 AC154213.2-201ENSMUST00000227138 187 ntBASIC4.12□□□□□ -1.75
Pcdh19Q80TF3 Gm23039-201ENSMUST00000083870 161 ntBASIC4.12□□□□□ -1.75
Pcdh19Q80TF3 Gm26314-201ENSMUST00000083891 107 ntBASIC4.12□□□□□ -1.75
Pcdh19Q80TF3 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Pcdh19Q80TF3 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Pcdh19Q80TF3 AC152159.1-201ENSMUST00000226719 2769 ntBASIC4.12□□□□□ -1.75
Pcdh19Q80TF3 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.12□□□□□ -1.75
Pcdh19Q80TF3 Gm44230-201ENSMUST00000203032 3550 ntBASIC4.11□□□□□ -1.75
Pcdh19Q80TF3 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.11□□□□□ -1.75
Pcdh19Q80TF3 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.11□□□□□ -1.75
Pcdh19Q80TF3 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Pcdh19Q80TF3 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Pcdh19Q80TF3 Gm22488-201ENSMUST00000116811 127 ntBASIC4.11□□□□□ -1.75
Pcdh19Q80TF3 Gm12617-201ENSMUST00000121268 381 ntBASIC4.11□□□□□ -1.75
Pcdh19Q80TF3 Gm25965-201ENSMUST00000157170 93 ntBASIC4.11□□□□□ -1.75
Pcdh19Q80TF3 Gm22968-201ENSMUST00000157955 118 ntBASIC4.11□□□□□ -1.75
Pcdh19Q80TF3 Gm22135-201ENSMUST00000158752 108 ntBASIC4.11□□□□□ -1.75
Pcdh19Q80TF3 Gm27520-201ENSMUST00000184872 81 ntBASIC4.11□□□□□ -1.75
Pcdh19Q80TF3 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC4.11□□□□□ -1.75
Pcdh19Q80TF3 Gm44354-201ENSMUST00000196017 143 ntBASIC4.11□□□□□ -1.75
Pcdh19Q80TF3 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.11□□□□□ -1.75
Pcdh19Q80TF3 Gm8942-201ENSMUST00000217892 400 ntBASIC4.11□□□□□ -1.75
Pcdh19Q80TF3 Gm46998-201ENSMUST00000221444 330 ntBASIC4.11□□□□□ -1.75
Pcdh19Q80TF3 Gm10042-201ENSMUST00000079884 78 ntBASIC4.11□□□□□ -1.75
Pcdh19Q80TF3 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Pcdh19Q80TF3 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.11□□□□□ -1.75
Pcdh19Q80TF3 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Pcdh19Q80TF3 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Pcdh19Q80TF3 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 Gm12071-201ENSMUST00000121968 469 ntBASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 Gm22378-201ENSMUST00000157481 111 ntBASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 Gm23586-201ENSMUST00000157657 123 ntBASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 Mir1967-201ENSMUST00000157789 82 ntBASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 Gm24503-201ENSMUST00000158454 135 ntBASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 Gm26219-201ENSMUST00000175216 71 ntBASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 Gm37361-201ENSMUST00000194345 132 ntBASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 Gm37693-201ENSMUST00000194562 234 ntBASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 Gm37417-201ENSMUST00000195257 454 ntBASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 Gm43304-201ENSMUST00000196803 326 ntBASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 Gm44376-201ENSMUST00000197570 128 ntBASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 Gm43441-201ENSMUST00000201458 205 ntBASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 Gm44594-201ENSMUST00000208982 407 ntBASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 Gm22294-201ENSMUST00000083308 104 ntBASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 Mir133a-1-201ENSMUST00000083465 68 ntBASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 Gm26165-201ENSMUST00000083791 138 ntBASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Pcdh19Q80TF3 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Pcdh19Q80TF3 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Pcdh19Q80TF3 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Pcdh19Q80TF3 Gm13155-201ENSMUST00000119277 646 ntBASIC4.09□□□□□ -1.75
Pcdh19Q80TF3 Gm8178-201ENSMUST00000121570 646 ntBASIC4.09□□□□□ -1.75
Pcdh19Q80TF3 Gm25104-201ENSMUST00000122476 163 ntBASIC4.09□□□□□ -1.75
Pcdh19Q80TF3 Gm26275-201ENSMUST00000157101 268 ntBASIC4.09□□□□□ -1.75
Pcdh19Q80TF3 Gm26373-201ENSMUST00000157833 103 ntBASIC4.09□□□□□ -1.75
Pcdh19Q80TF3 Gm24308-201ENSMUST00000177773 114 ntBASIC4.09□□□□□ -1.75
Pcdh19Q80TF3 Gm21960-201ENSMUST00000181924 452 ntBASIC4.09□□□□□ -1.75
Pcdh19Q80TF3 Gm8820-201ENSMUST00000204077 571 ntBASIC4.09□□□□□ -1.75
Pcdh19Q80TF3 Gm45013-201ENSMUST00000206883 178 ntBASIC4.09□□□□□ -1.75
Pcdh19Q80TF3 AC173345.2-201ENSMUST00000222795 153 ntBASIC4.09□□□□□ -1.75
Pcdh19Q80TF3 AC183092.1-201ENSMUST00000224301 153 ntBASIC4.09□□□□□ -1.75
Pcdh19Q80TF3 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Pcdh19Q80TF3 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.09□□□□□ -1.75
Pcdh19Q80TF3 Gm25896-201ENSMUST00000083713 136 ntBASIC4.09□□□□□ -1.75
Pcdh19Q80TF3 Gm26166-201ENSMUST00000083788 107 ntBASIC4.09□□□□□ -1.75
Pcdh19Q80TF3 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Pcdh19Q80TF3 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
Pcdh19Q80TF3 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Pcdh19Q80TF3 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Pcdh19Q80TF3 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.76
Pcdh19Q80TF3 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
Pcdh19Q80TF3 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.08□□□□□ -1.76
Pcdh19Q80TF3 Mir466b-3-201ENSMUST00000103806 81 ntBASIC4.08□□□□□ -1.76
Pcdh19Q80TF3 Gm26019-201ENSMUST00000104407 119 ntBASIC4.08□□□□□ -1.76
Pcdh19Q80TF3 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Pcdh19Q80TF3 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Pcdh19Q80TF3 Gm23651-201ENSMUST00000116755 120 ntBASIC4.08□□□□□ -1.76
Pcdh19Q80TF3 Gm15936-201ENSMUST00000118706 460 ntBASIC4.08□□□□□ -1.76
Pcdh19Q80TF3 Gm25985-201ENSMUST00000122677 107 ntBASIC4.08□□□□□ -1.76
Pcdh19Q80TF3 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.08□□□□□ -1.76
Pcdh19Q80TF3 Gm22036-201ENSMUST00000157279 215 ntBASIC4.08□□□□□ -1.76
Pcdh19Q80TF3 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Pcdh19Q80TF3 Gm5967-201ENSMUST00000172723 494 ntBASIC4.08□□□□□ -1.76
Pcdh19Q80TF3 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Pcdh19Q80TF3 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.08□□□□□ -1.76
Pcdh19Q80TF3 Gm43853-201ENSMUST00000197162 301 ntBASIC4.08□□□□□ -1.76
Pcdh19Q80TF3 Mir721-201ENSMUST00000200230 88 ntBASIC4.08□□□□□ -1.76
Pcdh19Q80TF3 Gm45420-201ENSMUST00000211243 425 ntBASIC4.08□□□□□ -1.76
Pcdh19Q80TF3 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Pcdh19Q80TF3 AC115291.2-201ENSMUST00000228335 437 ntBASIC4.08□□□□□ -1.76
Pcdh19Q80TF3 Gm23722-201ENSMUST00000083002 130 ntBASIC4.08□□□□□ -1.76
Pcdh19Q80TF3 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms