Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm45513-201ENSMUST00000210228 376 ntBASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 CT572985.2-201ENSMUST00000220496 211 ntBASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 Gm23721-201ENSMUST00000083005 107 ntBASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.21□□□□□ -1.9
Ubfd1Q78JW9 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Mir701-201ENSMUST00000102208 109 ntBASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Gm15844-201ENSMUST00000118016 576 ntBASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Gm13876-201ENSMUST00000118451 261 ntBASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Gm14877-201ENSMUST00000119803 478 ntBASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Gm15190-201ENSMUST00000120855 276 ntBASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Gm12071-201ENSMUST00000121968 469 ntBASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Gm13409-201ENSMUST00000122072 546 ntBASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Gm22532-201ENSMUST00000158822 140 ntBASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Gm21978-201ENSMUST00000179696 377 ntBASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Gm28008-201ENSMUST00000184021 186 ntBASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Gm28579-201ENSMUST00000186143 369 ntBASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Gm28717-201ENSMUST00000189950 315 ntBASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Gm19177-201ENSMUST00000204520 613 ntBASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Gm30674-201ENSMUST00000214523 392 ntBASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Gm24623-201ENSMUST00000082616 194 ntBASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Gm22806-201ENSMUST00000082738 136 ntBASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Gm23517-201ENSMUST00000082830 192 ntBASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Gm22353-201ENSMUST00000083918 136 ntBASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.2□□□□□ -1.9
Ubfd1Q78JW9 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Ubfd1Q78JW9 Gm26423-201ENSMUST00000104277 128 ntBASIC3.19□□□□□ -1.9
Ubfd1Q78JW9 Gm13457-201ENSMUST00000117885 267 ntBASIC3.19□□□□□ -1.9
Ubfd1Q78JW9 Gm15896-201ENSMUST00000118045 440 ntBASIC3.19□□□□□ -1.9
Ubfd1Q78JW9 Gm12858-201ENSMUST00000121913 208 ntBASIC3.19□□□□□ -1.9
Ubfd1Q78JW9 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Ubfd1Q78JW9 Gm27926-201ENSMUST00000157180 66 ntBASIC3.19□□□□□ -1.9
Ubfd1Q78JW9 Gm24138-201ENSMUST00000157572 114 ntBASIC3.19□□□□□ -1.9
Ubfd1Q78JW9 Gm25162-201ENSMUST00000158906 159 ntBASIC3.19□□□□□ -1.9
Ubfd1Q78JW9 Gm8338-201ENSMUST00000163928 363 ntBASIC3.19□□□□□ -1.9
Ubfd1Q78JW9 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ubfd1Q78JW9 Gm20672-201ENSMUST00000176605 261 ntBASIC3.19□□□□□ -1.9
Ubfd1Q78JW9 Gm25284-201ENSMUST00000180345 141 ntBASIC3.19□□□□□ -1.9
Ubfd1Q78JW9 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.19□□□□□ -1.9
Ubfd1Q78JW9 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Ubfd1Q78JW9 Gm28740-201ENSMUST00000186142 215 ntBASIC3.19□□□□□ -1.9
Ubfd1Q78JW9 Gm43239-201ENSMUST00000200131 201 ntBASIC3.19□□□□□ -1.9
Ubfd1Q78JW9 Gm45315-201ENSMUST00000209283 333 ntBASIC3.19□□□□□ -1.9
Ubfd1Q78JW9 AC166341.3-201ENSMUST00000221861 114 ntBASIC3.19□□□□□ -1.9
Ubfd1Q78JW9 Snord68-201ENSMUST00000082516 86 ntBASIC3.19□□□□□ -1.9
Ubfd1Q78JW9 Gm23378-201ENSMUST00000082942 107 ntBASIC3.19□□□□□ -1.9
Ubfd1Q78JW9 Mir181a-2-201ENSMUST00000083489 76 ntBASIC3.19□□□□□ -1.9
Ubfd1Q78JW9 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Gm24119-201ENSMUST00000103979 246 ntBASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Gm11322-201ENSMUST00000118095 435 ntBASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Gm11819-201ENSMUST00000122192 372 ntBASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Gm16218-201ENSMUST00000155424 388 ntBASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Gm22722-201ENSMUST00000157467 132 ntBASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Gm24997-201ENSMUST00000157910 105 ntBASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Gm22833-201ENSMUST00000158292 132 ntBASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Gm1833-201ENSMUST00000191608 682 ntBASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.18□□□□□ -1.9
Ubfd1Q78JW9 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 132 ms