Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm26171-201ENSMUST00000158422 131 ntBASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Gm27308-201ENSMUST00000184807 233 ntBASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Gm43529-201ENSMUST00000199178 412 ntBASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Gm23406-201ENSMUST00000082537 122 ntBASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Gm23412-201ENSMUST00000083017 107 ntBASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 AC121844.2-201ENSMUST00000219067 2066 ntBASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Gm16242-201ENSMUST00000117741 334 ntBASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Gm13876-201ENSMUST00000118451 261 ntBASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Gm14001-201ENSMUST00000118847 247 ntBASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Gm13903-201ENSMUST00000120945 193 ntBASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Gm11471-201ENSMUST00000121824 198 ntBASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Gm25325-201ENSMUST00000122559 86 ntBASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Gm26102-201ENSMUST00000157251 284 ntBASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Gm22187-201ENSMUST00000157819 129 ntBASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Gm34073-201ENSMUST00000195736 212 ntBASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Mir7116-201ENSMUST00000195956 70 ntBASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Gm44811-201ENSMUST00000209120 228 ntBASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Gm25257-201ENSMUST00000083907 110 ntBASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ddx55Q6ZPL9 Gm37661-201ENSMUST00000191863 1550 ntBASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Gm15101-201ENSMUST00000178818 1502 ntBASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Gm23752-201ENSMUST00000157584 115 ntBASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Gm23557-201ENSMUST00000157820 138 ntBASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Gm27510-201ENSMUST00000158214 64 ntBASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Gm17187-201ENSMUST00000164622 410 ntBASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Gm20923-201ENSMUST00000190009 319 ntBASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Gm21088-201ENSMUST00000190875 316 ntBASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Gm24350-202ENSMUST00000198309 132 ntBASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Gm45815-201ENSMUST00000220241 146 ntBASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Snora70-201ENSMUST00000083047 137 ntBASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Gm23679-201ENSMUST00000083161 119 ntBASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.72□□□□□ -1.81
Ddx55Q6ZPL9 Mir669g-201ENSMUST00000116809 123 ntBASIC3.71□□□□□ -1.82
Ddx55Q6ZPL9 Gm12924-201ENSMUST00000121747 318 ntBASIC3.71□□□□□ -1.82
Ddx55Q6ZPL9 Gm22073-201ENSMUST00000122668 189 ntBASIC3.71□□□□□ -1.82
Ddx55Q6ZPL9 Gm23214-201ENSMUST00000122716 157 ntBASIC3.71□□□□□ -1.82
Ddx55Q6ZPL9 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.71□□□□□ -1.82
Ddx55Q6ZPL9 Gm22532-201ENSMUST00000158822 140 ntBASIC3.71□□□□□ -1.82
Ddx55Q6ZPL9 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC3.71□□□□□ -1.82
Ddx55Q6ZPL9 Gm26400-201ENSMUST00000175012 85 ntBASIC3.71□□□□□ -1.82
Ddx55Q6ZPL9 Gm26297-201ENSMUST00000179464 132 ntBASIC3.71□□□□□ -1.82
Ddx55Q6ZPL9 Gm22263-201ENSMUST00000180060 104 ntBASIC3.71□□□□□ -1.82
Ddx55Q6ZPL9 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ddx55Q6ZPL9 Gm27532-201ENSMUST00000183726 113 ntBASIC3.71□□□□□ -1.82
Ddx55Q6ZPL9 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC3.71□□□□□ -1.82
Ddx55Q6ZPL9 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ddx55Q6ZPL9 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Ddx55Q6ZPL9 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ddx55Q6ZPL9 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Ddx55Q6ZPL9 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ddx55Q6ZPL9 Gm42536-201ENSMUST00000197562 1613 ntBASIC3.7□□□□□ -1.82
Ddx55Q6ZPL9 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ddx55Q6ZPL9 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.7□□□□□ -1.82
Ddx55Q6ZPL9 Gm26423-201ENSMUST00000104277 128 ntBASIC3.7□□□□□ -1.82
Ddx55Q6ZPL9 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC3.7□□□□□ -1.82
Ddx55Q6ZPL9 Gm14768-201ENSMUST00000122126 678 ntBASIC3.7□□□□□ -1.82
Ddx55Q6ZPL9 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.7□□□□□ -1.82
Ddx55Q6ZPL9 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.7□□□□□ -1.82
Ddx55Q6ZPL9 Gm20450-201ENSMUST00000173652 147 ntBASIC3.7□□□□□ -1.82
Ddx55Q6ZPL9 Mir3965-201ENSMUST00000175570 69 ntBASIC3.7□□□□□ -1.82
Ddx55Q6ZPL9 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Ddx55Q6ZPL9 Gm43355-201ENSMUST00000196541 346 ntBASIC3.7□□□□□ -1.82
Ddx55Q6ZPL9 Gm44419-201ENSMUST00000203338 229 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms