Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Mir5129-201ENSMUST00000174938 78 ntBASIC1.5□□□□□ -2.17
Scn10aQ6QIY3 Gm26195-201ENSMUST00000175035 101 ntBASIC1.5□□□□□ -2.17
Scn10aQ6QIY3 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Scn10aQ6QIY3 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Scn10aQ6QIY3 Gm7871-201ENSMUST00000195346 618 ntBASIC1.5□□□□□ -2.17
Scn10aQ6QIY3 Gm3724-201ENSMUST00000197957 349 ntBASIC1.5□□□□□ -2.17
Scn10aQ6QIY3 AC172027.1-201ENSMUST00000217659 337 ntBASIC1.5□□□□□ -2.17
Scn10aQ6QIY3 AC167202.1-201ENSMUST00000219027 331 ntBASIC1.5□□□□□ -2.17
Scn10aQ6QIY3 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC1.5□□□□□ -2.17
Scn10aQ6QIY3 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.5□□□□□ -2.17
Scn10aQ6QIY3 Gm23727-201ENSMUST00000083352 164 ntBASIC1.5□□□□□ -2.17
Scn10aQ6QIY3 Gm43216-201ENSMUST00000196295 1333 ntBASIC1.5□□□□□ -2.17
Scn10aQ6QIY3 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Scn10aQ6QIY3 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Scn10aQ6QIY3 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.49□□□□□ -2.17
Scn10aQ6QIY3 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Scn10aQ6QIY3 Gm15176-201ENSMUST00000117734 135 ntBASIC1.49□□□□□ -2.17
Scn10aQ6QIY3 Gm13454-201ENSMUST00000118166 483 ntBASIC1.49□□□□□ -2.17
Scn10aQ6QIY3 Gm13239-201ENSMUST00000119920 637 ntBASIC1.49□□□□□ -2.17
Scn10aQ6QIY3 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC1.49□□□□□ -2.17
Scn10aQ6QIY3 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Scn10aQ6QIY3 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.49□□□□□ -2.17
Scn10aQ6QIY3 Gm44634-201ENSMUST00000206119 152 ntBASIC1.49□□□□□ -2.17
Scn10aQ6QIY3 AC158803.1-201ENSMUST00000219495 316 ntBASIC1.49□□□□□ -2.17
Scn10aQ6QIY3 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Scn10aQ6QIY3 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Scn10aQ6QIY3 n-R5s216-201ENSMUST00000122755 112 ntBASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Gm22037-201ENSMUST00000157280 296 ntBASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Gm2930-201ENSMUST00000170403 474 ntBASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Gm29263-201ENSMUST00000188718 463 ntBASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Gm28384-201ENSMUST00000189079 463 ntBASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Gm18645-201ENSMUST00000209593 651 ntBASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Gm24948-201ENSMUST00000082866 207 ntBASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Gm25409-201ENSMUST00000083764 131 ntBASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Gm14867-201ENSMUST00000120156 866 ntBASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Gm25624-201ENSMUST00000157222 275 ntBASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Gm37002-201ENSMUST00000194560 373 ntBASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Gm29809-201ENSMUST00000218423 493 ntBASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Gm25080-201ENSMUST00000082526 107 ntBASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.48□□□□□ -2.17
Scn10aQ6QIY3 Gm13153-201ENSMUST00000120969 637 ntBASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Gm17162-201ENSMUST00000168538 473 ntBASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Gm29641-201ENSMUST00000188955 259 ntBASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Gm43007-201ENSMUST00000197618 291 ntBASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Gm43171-201ENSMUST00000199882 291 ntBASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Gm14366-201ENSMUST00000121970 730 ntBASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Gm17164-201ENSMUST00000169013 506 ntBASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Gm23933-201ENSMUST00000178405 79 ntBASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Gm37993-201ENSMUST00000195301 988 ntBASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Gm19140-201ENSMUST00000209790 421 ntBASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Gm9068-201ENSMUST00000217393 455 ntBASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Gm19326-201ENSMUST00000219818 326 ntBASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Gm24165-201ENSMUST00000082718 128 ntBASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Gm26206-201ENSMUST00000082908 110 ntBASIC1.47□□□□□ -2.17
Scn10aQ6QIY3 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Scn10aQ6QIY3 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.46□□□□□ -2.18
Scn10aQ6QIY3 Gm14669-201ENSMUST00000118841 250 ntBASIC1.46□□□□□ -2.18
Scn10aQ6QIY3 Gm12646-201ENSMUST00000119144 238 ntBASIC1.46□□□□□ -2.18
Scn10aQ6QIY3 Gm23328-201ENSMUST00000157418 132 ntBASIC1.46□□□□□ -2.18
Scn10aQ6QIY3 Gm24304-201ENSMUST00000177635 107 ntBASIC1.46□□□□□ -2.18
Scn10aQ6QIY3 Mir6376-201ENSMUST00000185149 131 ntBASIC1.46□□□□□ -2.18
Scn10aQ6QIY3 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.46□□□□□ -2.18
Scn10aQ6QIY3 CT573422.1-201ENSMUST00000216655 405 ntBASIC1.46□□□□□ -2.18
Scn10aQ6QIY3 Gm2348-201ENSMUST00000108782 300 ntBASIC1.45□□□□□ -2.18
Scn10aQ6QIY3 Gm16431-201ENSMUST00000117454 431 ntBASIC1.45□□□□□ -2.18
Scn10aQ6QIY3 Gm26256-201ENSMUST00000122499 186 ntBASIC1.45□□□□□ -2.18
Scn10aQ6QIY3 Gm25621-201ENSMUST00000157223 114 ntBASIC1.45□□□□□ -2.18
Scn10aQ6QIY3 Gm22603-201ENSMUST00000157603 96 ntBASIC1.45□□□□□ -2.18
Scn10aQ6QIY3 Gm17119-201ENSMUST00000163943 280 ntBASIC1.45□□□□□ -2.18
Scn10aQ6QIY3 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Scn10aQ6QIY3 Gm21885-201ENSMUST00000178891 327 ntBASIC1.45□□□□□ -2.18
Scn10aQ6QIY3 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC1.45□□□□□ -2.18
Scn10aQ6QIY3 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC1.45□□□□□ -2.18
Scn10aQ6QIY3 Gm43284-201ENSMUST00000200103 253 ntBASIC1.45□□□□□ -2.18
Scn10aQ6QIY3 Gm43979-201ENSMUST00000203179 475 ntBASIC1.45□□□□□ -2.18
Scn10aQ6QIY3 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC1.45□□□□□ -2.18
Scn10aQ6QIY3 Gm23628-201ENSMUST00000082464 173 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms