Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim28Q62318 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Trim28Q62318 Gm23256-201ENSMUST00000102235 110 ntBASIC4.02□□□□□ -1.77
Trim28Q62318 Mir667-201ENSMUST00000102441 92 ntBASIC4.02□□□□□ -1.77
Trim28Q62318 Gm22831-201ENSMUST00000102473 109 ntBASIC4.02□□□□□ -1.77
Trim28Q62318 Gm26140-201ENSMUST00000103807 110 ntBASIC4.02□□□□□ -1.77
Trim28Q62318 Gm15526-201ENSMUST00000112504 204 ntBASIC4.02□□□□□ -1.77
Trim28Q62318 Gm24586-201ENSMUST00000116695 89 ntBASIC4.02□□□□□ -1.77
Trim28Q62318 Gm13355-201ENSMUST00000117996 317 ntBASIC4.02□□□□□ -1.77
Trim28Q62318 Gm14008-201ENSMUST00000120483 274 ntBASIC4.02□□□□□ -1.77
Trim28Q62318 Gm12785-201ENSMUST00000122052 172 ntBASIC4.02□□□□□ -1.77
Trim28Q62318 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC4.02□□□□□ -1.77
Trim28Q62318 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC4.02□□□□□ -1.77
Trim28Q62318 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim28Q62318 Gm25341-201ENSMUST00000157461 268 ntBASIC4.02□□□□□ -1.77
Trim28Q62318 Gm25883-201ENSMUST00000157781 271 ntBASIC4.02□□□□□ -1.77
Trim28Q62318 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim28Q62318 Gm22908-201ENSMUST00000177620 110 ntBASIC4.02□□□□□ -1.77
Trim28Q62318 Gm27747-201ENSMUST00000184707 85 ntBASIC4.02□□□□□ -1.77
Trim28Q62318 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC4.02□□□□□ -1.77
Trim28Q62318 Gm44703-201ENSMUST00000205724 248 ntBASIC4.02□□□□□ -1.77
Trim28Q62318 Gm44925-201ENSMUST00000208879 2110 ntBASIC4.02□□□□□ -1.77
Trim28Q62318 Gm46194-201ENSMUST00000218136 320 ntBASIC4.02□□□□□ -1.77
Trim28Q62318 Gm45815-201ENSMUST00000220241 146 ntBASIC4.02□□□□□ -1.77
Trim28Q62318 AC133598.3-201ENSMUST00000224322 568 ntBASIC4.02□□□□□ -1.77
Trim28Q62318 AC127371.1-202ENSMUST00000228923 306 ntBASIC4.02□□□□□ -1.77
Trim28Q62318 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim28Q62318 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.02□□□□□ -1.77
Trim28Q62318 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim28Q62318 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim28Q62318 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Trim28Q62318 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim28Q62318 Gm23668-201ENSMUST00000157465 111 ntBASIC4.01□□□□□ -1.77
Trim28Q62318 Gm24240-201ENSMUST00000157785 135 ntBASIC4.01□□□□□ -1.77
Trim28Q62318 Gm17162-201ENSMUST00000168538 473 ntBASIC4.01□□□□□ -1.77
Trim28Q62318 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trim28Q62318 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trim28Q62318 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Trim28Q62318 Gm37128-201ENSMUST00000192599 232 ntBASIC4.01□□□□□ -1.77
Trim28Q62318 Gm42925-201ENSMUST00000197359 285 ntBASIC4.01□□□□□ -1.77
Trim28Q62318 Igkv15-102-201ENSMUST00000197885 287 ntBASIC4.01□□□□□ -1.77
Trim28Q62318 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC4.01□□□□□ -1.77
Trim28Q62318 Gm35931-201ENSMUST00000203931 448 ntBASIC4.01□□□□□ -1.77
Trim28Q62318 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC4.01□□□□□ -1.77
Trim28Q62318 Gm45778-201ENSMUST00000211959 153 ntBASIC4.01□□□□□ -1.77
Trim28Q62318 AC150314.1-201ENSMUST00000214798 238 ntBASIC4.01□□□□□ -1.77
Trim28Q62318 Gm23645-201ENSMUST00000083228 108 ntBASIC4.01□□□□□ -1.77
Trim28Q62318 Gm22974-201ENSMUST00000083301 103 ntBASIC4.01□□□□□ -1.77
Trim28Q62318 Mir496a-201ENSMUST00000093627 79 ntBASIC4.01□□□□□ -1.77
Trim28Q62318 Gm8074-201ENSMUST00000095071 252 ntBASIC4.01□□□□□ -1.77
Trim28Q62318 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Trim28Q62318 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim28Q62318 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim28Q62318 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim28Q62318 CT009504.1-201ENSMUST00000218252 3330 ntBASIC4.01□□□□□ -1.77
Trim28Q62318 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Trim28Q62318 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Trim28Q62318 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Trim28Q62318 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim28Q62318 Gm14469-201ENSMUST00000118363 202 ntBASIC4□□□□□ -1.77
Trim28Q62318 Gm6265-201ENSMUST00000149263 231 ntBASIC4□□□□□ -1.77
Trim28Q62318 Gm22561-201ENSMUST00000157331 84 ntBASIC4□□□□□ -1.77
Trim28Q62318 Gm24001-201ENSMUST00000158463 85 ntBASIC4□□□□□ -1.77
Trim28Q62318 Ear-ps8-201ENSMUST00000161935 354 ntBASIC4□□□□□ -1.77
Trim28Q62318 Gm27645-201ENSMUST00000183348 77 ntBASIC4□□□□□ -1.77
Trim28Q62318 Gm27585-201ENSMUST00000183717 199 ntBASIC4□□□□□ -1.77
Trim28Q62318 Gm28163-201ENSMUST00000187099 325 ntBASIC4□□□□□ -1.77
Trim28Q62318 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4□□□□□ -1.77
Trim28Q62318 Gm29665-201ENSMUST00000191457 528 ntBASIC4□□□□□ -1.77
Trim28Q62318 Gm38332-201ENSMUST00000194189 147 ntBASIC4□□□□□ -1.77
Trim28Q62318 AC125374.2-201ENSMUST00000214278 162 ntBASIC4□□□□□ -1.77
Trim28Q62318 AC134254.5-201ENSMUST00000223436 400 ntBASIC4□□□□□ -1.77
Trim28Q62318 AC118006.1-201ENSMUST00000224211 501 ntBASIC4□□□□□ -1.77
Trim28Q62318 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Trim28Q62318 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim28Q62318 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim28Q62318 Gm44682-201ENSMUST00000208501 2614 ntBASIC4□□□□□ -1.77
Trim28Q62318 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Trim28Q62318 Gm42684-201ENSMUST00000197663 3615 ntBASIC4□□□□□ -1.77
Trim28Q62318 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Trim28Q62318 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
Trim28Q62318 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Trim28Q62318 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim28Q62318 Gm25915-201ENSMUST00000104265 126 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Gm23911-201ENSMUST00000104596 134 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Mir291a-201ENSMUST00000104815 82 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Gm14296-202ENSMUST00000108931 750 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Gm14627-201ENSMUST00000118931 567 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Gm12723-201ENSMUST00000120700 451 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Gm14768-201ENSMUST00000122126 678 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Gm26028-201ENSMUST00000158660 294 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Ear-ps4-201ENSMUST00000166834 450 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.99□□□□□ -1.77
Trim28Q62318 Gm27928-201ENSMUST00000183747 256 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms