Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm24517-201ENSMUST00000122560 107 ntBASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Gm23885-201ENSMUST00000122682 294 ntBASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Gm27396-201ENSMUST00000157708 58 ntBASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Gm25460-201ENSMUST00000157954 127 ntBASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Gm24857-201ENSMUST00000158061 310 ntBASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Gm24768-201ENSMUST00000158512 94 ntBASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Gm23196-201ENSMUST00000158806 107 ntBASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Gm21894-201ENSMUST00000179631 546 ntBASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Gm27659-201ENSMUST00000183472 98 ntBASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Gm44212-201ENSMUST00000205016 897 ntBASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 AC153957.1-201ENSMUST00000215235 229 ntBASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Gm20304-201ENSMUST00000218168 444 ntBASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 AC124537.1-201ENSMUST00000222890 159 ntBASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 AC129541.1-201ENSMUST00000226940 523 ntBASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 AC130477.2-201ENSMUST00000228158 274 ntBASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Gm25788-201ENSMUST00000082721 131 ntBASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Mir687-201ENSMUST00000102166 89 ntBASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 Gm14765-201ENSMUST00000121954 326 ntBASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 Gm15914-201ENSMUST00000161922 309 ntBASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 Gm23402-201ENSMUST00000178130 107 ntBASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 Gm25670-201ENSMUST00000178423 107 ntBASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 Gm26239-201ENSMUST00000178842 107 ntBASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 Gm24267-201ENSMUST00000179841 107 ntBASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 Gm2719-201ENSMUST00000191929 444 ntBASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 Gm19032-201ENSMUST00000208584 592 ntBASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 AC192616.3-201ENSMUST00000220797 1124 ntBASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 Gm17890-201ENSMUST00000221419 757 ntBASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 AC166830.1-201ENSMUST00000224201 533 ntBASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 AC138667.2-201ENSMUST00000224880 598 ntBASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 n-R5s176-201ENSMUST00000082683 109 ntBASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 Gm24292-201ENSMUST00000082888 107 ntBASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 Mir300-201ENSMUST00000083485 79 ntBASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Trav3-3Q5R1C3 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 Gm23202-201ENSMUST00000104376 129 ntBASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 Mir3096-201ENSMUST00000116685 71 ntBASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 Gm15215-201ENSMUST00000117773 489 ntBASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 Gm14887-201ENSMUST00000119522 663 ntBASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 Gm23429-201ENSMUST00000122486 149 ntBASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 Gm25325-201ENSMUST00000122559 86 ntBASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 Gm15281-201ENSMUST00000125181 351 ntBASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 Gm23381-201ENSMUST00000157676 94 ntBASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 Gm23865-201ENSMUST00000157723 97 ntBASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 Gm2930-201ENSMUST00000170403 474 ntBASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 Gm23619-201ENSMUST00000178411 94 ntBASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 Gm25474-201ENSMUST00000179052 94 ntBASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 Gm22047-201ENSMUST00000179176 94 ntBASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 Gm24306-201ENSMUST00000180229 79 ntBASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 Mir3068-202ENSMUST00000197755 79 ntBASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 Gm42164-201ENSMUST00000198881 379 ntBASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.6□□□□□ -2.15
Trav3-3Q5R1C3 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
Trav3-3Q5R1C3 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.59□□□□□ -2.15
Trav3-3Q5R1C3 Mir190b-201ENSMUST00000104803 80 ntBASIC1.59□□□□□ -2.15
Trav3-3Q5R1C3 Gm7164-201ENSMUST00000117503 450 ntBASIC1.59□□□□□ -2.15
Trav3-3Q5R1C3 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.59□□□□□ -2.15
Trav3-3Q5R1C3 Gm22534-201ENSMUST00000158173 104 ntBASIC1.59□□□□□ -2.15
Trav3-3Q5R1C3 Gm25711-201ENSMUST00000158633 128 ntBASIC1.59□□□□□ -2.15
Trav3-3Q5R1C3 Gm21638-201ENSMUST00000179473 836 ntBASIC1.59□□□□□ -2.15
Trav3-3Q5R1C3 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Trav3-3Q5R1C3 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC1.59□□□□□ -2.15
Trav3-3Q5R1C3 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Trav3-3Q5R1C3 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC1.59□□□□□ -2.15
Trav3-3Q5R1C3 Gm45730-201ENSMUST00000212560 395 ntBASIC1.59□□□□□ -2.15
Trav3-3Q5R1C3 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC1.59□□□□□ -2.15
Trav3-3Q5R1C3 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Trav3-3Q5R1C3 CT009733.1-203ENSMUST00000224033 451 ntBASIC1.59□□□□□ -2.15
Trav3-3Q5R1C3 AC167192.4-201ENSMUST00000224087 993 ntBASIC1.59□□□□□ -2.15
Trav3-3Q5R1C3 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.59□□□□□ -2.15
Trav3-3Q5R1C3 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Trav3-3Q5R1C3 Mir222-201ENSMUST00000083537 79 ntBASIC1.59□□□□□ -2.15
Trav3-3Q5R1C3 Mir301-201ENSMUST00000083655 86 ntBASIC1.59□□□□□ -2.15
Trav3-3Q5R1C3 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Trav3-3Q5R1C3 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.16
Trav3-3Q5R1C3 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
Trav3-3Q5R1C3 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Trav3-3Q5R1C3 Gm22497-201ENSMUST00000104499 131 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 107 ms