Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim41Q5NCC3 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Trim41Q5NCC3 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Trim41Q5NCC3 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim41Q5NCC3 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC7.35□□□□□ -1.23
Trim41Q5NCC3 Gm45517-201ENSMUST00000209973 2468 ntBASIC7.35□□□□□ -1.23
Trim41Q5NCC3 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Trim41Q5NCC3 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Trim41Q5NCC3 Gm22373-201ENSMUST00000104584 89 ntBASIC7.35□□□□□ -1.23
Trim41Q5NCC3 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC7.35□□□□□ -1.23
Trim41Q5NCC3 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC7.35□□□□□ -1.23
Trim41Q5NCC3 Gm23084-201ENSMUST00000157850 114 ntBASIC7.35□□□□□ -1.23
Trim41Q5NCC3 Mir3103-201ENSMUST00000175474 67 ntBASIC7.35□□□□□ -1.23
Trim41Q5NCC3 Gm22120-201ENSMUST00000175590 70 ntBASIC7.35□□□□□ -1.23
Trim41Q5NCC3 Gm23215-201ENSMUST00000178153 121 ntBASIC7.35□□□□□ -1.23
Trim41Q5NCC3 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC7.35□□□□□ -1.23
Trim41Q5NCC3 Gm45080-201ENSMUST00000206648 283 ntBASIC7.35□□□□□ -1.23
Trim41Q5NCC3 Gm22576-201ENSMUST00000083733 104 ntBASIC7.35□□□□□ -1.23
Trim41Q5NCC3 Gm22155-201ENSMUST00000083836 162 ntBASIC7.35□□□□□ -1.23
Trim41Q5NCC3 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC7.35□□□□□ -1.23
Trim41Q5NCC3 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim41Q5NCC3 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Trim41Q5NCC3 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Trim41Q5NCC3 Gm38382-201ENSMUST00000193790 2499 ntBASIC7.34□□□□□ -1.23
Trim41Q5NCC3 Gm23320-201ENSMUST00000104462 127 ntBASIC7.34□□□□□ -1.23
Trim41Q5NCC3 Gm8666-201ENSMUST00000117517 292 ntBASIC7.34□□□□□ -1.23
Trim41Q5NCC3 Gm12954-201ENSMUST00000118610 611 ntBASIC7.34□□□□□ -1.23
Trim41Q5NCC3 Gm15936-201ENSMUST00000118706 460 ntBASIC7.34□□□□□ -1.23
Trim41Q5NCC3 Gm24916-201ENSMUST00000157287 79 ntBASIC7.34□□□□□ -1.23
Trim41Q5NCC3 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC7.34□□□□□ -1.23
Trim41Q5NCC3 Gm23677-201ENSMUST00000083156 104 ntBASIC7.34□□□□□ -1.23
Trim41Q5NCC3 Gm25257-201ENSMUST00000083907 110 ntBASIC7.34□□□□□ -1.23
Trim41Q5NCC3 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Trim41Q5NCC3 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC7.34□□□□□ -1.23
Trim41Q5NCC3 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Trim41Q5NCC3 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Trim41Q5NCC3 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC7.34□□□□□ -1.24
Trim41Q5NCC3 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Trim41Q5NCC3 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim41Q5NCC3 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim41Q5NCC3 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Trim41Q5NCC3 Gm23226-201ENSMUST00000116927 103 ntBASIC7.33□□□□□ -1.24
Trim41Q5NCC3 Gm13756-201ENSMUST00000117618 222 ntBASIC7.33□□□□□ -1.24
Trim41Q5NCC3 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim41Q5NCC3 Gm22314-201ENSMUST00000158007 281 ntBASIC7.33□□□□□ -1.24
Trim41Q5NCC3 Gm22156-201ENSMUST00000158409 141 ntBASIC7.33□□□□□ -1.24
Trim41Q5NCC3 Gm23196-201ENSMUST00000158806 107 ntBASIC7.33□□□□□ -1.24
Trim41Q5NCC3 Gm7241-201ENSMUST00000159853 357 ntBASIC7.33□□□□□ -1.24
Trim41Q5NCC3 Mir6996-201ENSMUST00000183922 61 ntBASIC7.33□□□□□ -1.24
Trim41Q5NCC3 AC100209.2-201ENSMUST00000224461 451 ntBASIC7.33□□□□□ -1.24
Trim41Q5NCC3 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC7.33□□□□□ -1.24
Trim41Q5NCC3 n-R5s151-201ENSMUST00000083959 119 ntBASIC7.33□□□□□ -1.24
Trim41Q5NCC3 Gm37296-201ENSMUST00000192728 2922 ntBASIC7.33□□□□□ -1.24
Trim41Q5NCC3 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim41Q5NCC3 Gm44438-201ENSMUST00000204388 3236 ntBASIC7.33□□□□□ -1.24
Trim41Q5NCC3 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC7.33□□□□□ -1.24
Trim41Q5NCC3 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim41Q5NCC3 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Trim41Q5NCC3 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC7.32□□□□□ -1.24
Trim41Q5NCC3 Gm21991-201ENSMUST00000180006 508 ntBASIC7.32□□□□□ -1.24
Trim41Q5NCC3 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim41Q5NCC3 Gm44337-201ENSMUST00000196553 114 ntBASIC7.32□□□□□ -1.24
Trim41Q5NCC3 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC7.32□□□□□ -1.24
Trim41Q5NCC3 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim41Q5NCC3 AF357428-201ENSMUST00000083815 69 ntBASIC7.32□□□□□ -1.24
Trim41Q5NCC3 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim41Q5NCC3 Gm38101-201ENSMUST00000193484 3557 ntBASIC7.32□□□□□ -1.24
Trim41Q5NCC3 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Trim41Q5NCC3 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim41Q5NCC3 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Trim41Q5NCC3 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim41Q5NCC3 CT009733.2-202ENSMUST00000224171 4748 ntBASIC7.31□□□□□ -1.24
Trim41Q5NCC3 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Trim41Q5NCC3 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Trim41Q5NCC3 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Trim41Q5NCC3 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim41Q5NCC3 Mdga2-203ENSMUST00000113942 423 ntBASIC7.31□□□□□ -1.24
Trim41Q5NCC3 Gm24636-201ENSMUST00000158673 288 ntBASIC7.31□□□□□ -1.24
Trim41Q5NCC3 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Trim41Q5NCC3 Trav5-2-201ENSMUST00000199855 280 ntBASIC7.31□□□□□ -1.24
Trim41Q5NCC3 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim41Q5NCC3 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim41Q5NCC3 Mir21a-201ENSMUST00000083521 92 ntBASIC7.31□□□□□ -1.24
Trim41Q5NCC3 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC7.31□□□□□ -1.24
Trim41Q5NCC3 AC159193.2-201ENSMUST00000220865 4251 ntBASIC7.31□□□□□ -1.24
Trim41Q5NCC3 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim41Q5NCC3 Gm45137-201ENSMUST00000208652 4415 ntBASIC7.3□□□□□ -1.24
Trim41Q5NCC3 Gm6762-201ENSMUST00000121769 289 ntBASIC7.3□□□□□ -1.24
Trim41Q5NCC3 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC7.3□□□□□ -1.24
Trim41Q5NCC3 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC7.3□□□□□ -1.24
Trim41Q5NCC3 Gm23443-201ENSMUST00000082916 128 ntBASIC7.3□□□□□ -1.24
Trim41Q5NCC3 Gm23510-201ENSMUST00000083083 163 ntBASIC7.3□□□□□ -1.24
Trim41Q5NCC3 n-R5s54-201ENSMUST00000083837 112 ntBASIC7.3□□□□□ -1.24
Trim41Q5NCC3 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC7.3□□□□□ -1.24
Trim41Q5NCC3 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim41Q5NCC3 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Trim41Q5NCC3 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Trim41Q5NCC3 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
Trim41Q5NCC3 Dbpht2-202ENSMUST00000221311 5341 ntBASIC7.3□□□□□ -1.24
Trim41Q5NCC3 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms