Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Mir6386-201ENSMUST00000183558 104 ntBASIC2.84□□□□□ -1.95
Trim63Q38HM4 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC2.84□□□□□ -1.95
Trim63Q38HM4 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC2.84□□□□□ -1.95
Trim63Q38HM4 Mir5121-201ENSMUST00000198528 74 ntBASIC2.84□□□□□ -1.95
Trim63Q38HM4 Gm6051-201ENSMUST00000201529 352 ntBASIC2.84□□□□□ -1.95
Trim63Q38HM4 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC2.84□□□□□ -1.95
Trim63Q38HM4 Gm44927-201ENSMUST00000207573 716 ntBASIC2.84□□□□□ -1.95
Trim63Q38HM4 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
Trim63Q38HM4 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC2.84□□□□□ -1.95
Trim63Q38HM4 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Trim63Q38HM4 Gm33654-201ENSMUST00000221704 215 ntBASIC2.84□□□□□ -1.95
Trim63Q38HM4 Gm21937-201ENSMUST00000222825 218 ntBASIC2.84□□□□□ -1.95
Trim63Q38HM4 AC119241.1-201ENSMUST00000223651 534 ntBASIC2.84□□□□□ -1.95
Trim63Q38HM4 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC2.84□□□□□ -1.95
Trim63Q38HM4 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Trim63Q38HM4 n-R5s7-201ENSMUST00000083755 121 ntBASIC2.84□□□□□ -1.95
Trim63Q38HM4 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Trim63Q38HM4 Gm38031-201ENSMUST00000191819 3015 ntBASIC2.84□□□□□ -1.96
Trim63Q38HM4 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.83□□□□□ -1.96
Trim63Q38HM4 Gm24280-201ENSMUST00000104237 134 ntBASIC2.83□□□□□ -1.96
Trim63Q38HM4 Gm13672-201ENSMUST00000117554 459 ntBASIC2.83□□□□□ -1.96
Trim63Q38HM4 Gm11600-201ENSMUST00000119592 240 ntBASIC2.83□□□□□ -1.96
Trim63Q38HM4 Gm25269-201ENSMUST00000122601 104 ntBASIC2.83□□□□□ -1.96
Trim63Q38HM4 Gm25625-201ENSMUST00000157221 96 ntBASIC2.83□□□□□ -1.96
Trim63Q38HM4 Gm22536-201ENSMUST00000158171 134 ntBASIC2.83□□□□□ -1.96
Trim63Q38HM4 Gm22435-201ENSMUST00000158552 128 ntBASIC2.83□□□□□ -1.96
Trim63Q38HM4 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Trim63Q38HM4 Gm15900-201ENSMUST00000161584 342 ntBASIC2.83□□□□□ -1.96
Trim63Q38HM4 Mir6975-201ENSMUST00000184879 61 ntBASIC2.83□□□□□ -1.96
Trim63Q38HM4 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.83□□□□□ -1.96
Trim63Q38HM4 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.83□□□□□ -1.96
Trim63Q38HM4 Gm23404-201ENSMUST00000082543 97 ntBASIC2.83□□□□□ -1.96
Trim63Q38HM4 Mir34b-201ENSMUST00000083558 84 ntBASIC2.83□□□□□ -1.96
Trim63Q38HM4 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.83□□□□□ -1.96
Trim63Q38HM4 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trim63Q38HM4 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Trim63Q38HM4 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trim63Q38HM4 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.82□□□□□ -1.96
Trim63Q38HM4 Snord14c-201ENSMUST00000101927 86 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Trim63Q38HM4 Gm23014-201ENSMUST00000104144 130 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Gm24855-201ENSMUST00000104848 97 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Gm26473-201ENSMUST00000116763 127 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Gm13862-201ENSMUST00000121220 197 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Gm24892-201ENSMUST00000122747 104 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Gm22789-201ENSMUST00000157884 130 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Gm25982-201ENSMUST00000157920 101 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Gm22398-201ENSMUST00000174941 125 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Gm25731-201ENSMUST00000175167 125 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Gm6625-201ENSMUST00000177870 272 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Gm25457-201ENSMUST00000179509 107 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Gm25121-201ENSMUST00000179846 79 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Mir6355-201ENSMUST00000183687 106 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Mir6996-201ENSMUST00000183922 61 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Gm27875-201ENSMUST00000184425 123 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Gm28304-201ENSMUST00000185977 312 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Gm29256-201ENSMUST00000189094 312 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Gm28484-201ENSMUST00000190606 312 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Gm43238-201ENSMUST00000196463 359 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Gm43884-201ENSMUST00000204251 559 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.82□□□□□ -1.96
Trim63Q38HM4 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Gm5548-201ENSMUST00000055878 397 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Trim63Q38HM4 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.82□□□□□ -1.96
Trim63Q38HM4 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Trim63Q38HM4 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Trim63Q38HM4 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Trim63Q38HM4 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.81□□□□□ -1.96
Trim63Q38HM4 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Trim63Q38HM4 Gm42768-201ENSMUST00000197734 2897 ntBASIC2.81□□□□□ -1.96
Trim63Q38HM4 Gm23608-201ENSMUST00000104545 128 ntBASIC2.81□□□□□ -1.96
Trim63Q38HM4 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trim63Q38HM4 Gm15151-201ENSMUST00000117106 177 ntBASIC2.81□□□□□ -1.96
Trim63Q38HM4 Gm13167-201ENSMUST00000118554 578 ntBASIC2.81□□□□□ -1.96
Trim63Q38HM4 Gm14352-201ENSMUST00000119250 449 ntBASIC2.81□□□□□ -1.96
Trim63Q38HM4 Gm12884-201ENSMUST00000120371 325 ntBASIC2.81□□□□□ -1.96
Trim63Q38HM4 Gm14574-201ENSMUST00000120644 279 ntBASIC2.81□□□□□ -1.96
Trim63Q38HM4 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC2.81□□□□□ -1.96
Trim63Q38HM4 Gm23470-201ENSMUST00000157129 120 ntBASIC2.81□□□□□ -1.96
Trim63Q38HM4 Gm2862-201ENSMUST00000161524 328 ntBASIC2.81□□□□□ -1.96
Trim63Q38HM4 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.81□□□□□ -1.96
Trim63Q38HM4 Gm24388-201ENSMUST00000177872 107 ntBASIC2.81□□□□□ -1.96
Trim63Q38HM4 Gm21978-201ENSMUST00000179696 377 ntBASIC2.81□□□□□ -1.96
Trim63Q38HM4 Gm28627-201ENSMUST00000186141 453 ntBASIC2.81□□□□□ -1.96
Trim63Q38HM4 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.81□□□□□ -1.96
Trim63Q38HM4 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC2.81□□□□□ -1.96
Trim63Q38HM4 Gm44757-201ENSMUST00000206373 157 ntBASIC2.81□□□□□ -1.96
Trim63Q38HM4 Gm5023-201ENSMUST00000217442 587 ntBASIC2.81□□□□□ -1.96
Trim63Q38HM4 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.81□□□□□ -1.96
Trim63Q38HM4 Gm25896-201ENSMUST00000083713 136 ntBASIC2.81□□□□□ -1.96
Trim63Q38HM4 Gm22826-201ENSMUST00000083774 165 ntBASIC2.81□□□□□ -1.96
Trim63Q38HM4 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Trim63Q38HM4 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Trim63Q38HM4 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.81□□□□□ -1.96
Trim63Q38HM4 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trim63Q38HM4 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms