Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col28a1Q2UY11 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 AC133079.1-201ENSMUST00000220943 1881 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Gm23422-201ENSMUST00000102000 107 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Gm24671-201ENSMUST00000104159 158 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Gm26423-201ENSMUST00000104277 128 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Mir466h-201ENSMUST00000104748 81 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Gm15526-201ENSMUST00000112504 204 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Gm3788-201ENSMUST00000119949 136 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Gm13725-201ENSMUST00000122139 207 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Gm25341-201ENSMUST00000157461 268 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Gm24666-201ENSMUST00000158937 167 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Mir7k-201ENSMUST00000184115 110 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Gm27747-201ENSMUST00000184707 85 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Gm28744-201ENSMUST00000189939 340 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Igkv13-64-201ENSMUST00000198143 343 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Gm7726-201ENSMUST00000206241 231 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Gm24457-201ENSMUST00000083196 105 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Mir496a-201ENSMUST00000093627 79 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Mir452-201ENSMUST00000093629 85 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Gm23741-201ENSMUST00000097237 171 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.12□□□□□ -1.91
Col28a1Q2UY11 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm23747-201ENSMUST00000104228 131 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm14792-201ENSMUST00000119725 258 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm12686-201ENSMUST00000120546 397 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm22036-201ENSMUST00000157279 215 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm23716-201ENSMUST00000157348 144 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm23120-201ENSMUST00000157654 287 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm25454-201ENSMUST00000157947 315 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm24537-201ENSMUST00000157950 102 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm24876-201ENSMUST00000158780 92 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm16232-201ENSMUST00000162856 167 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Mup-ps11-201ENSMUST00000178040 545 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Mup-ps3-201ENSMUST00000178315 545 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm25360-201ENSMUST00000178786 191 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm29147-201ENSMUST00000186846 315 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm29352-201ENSMUST00000188054 544 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm28160-201ENSMUST00000191229 315 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm44092-201ENSMUST00000204470 258 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm44157-201ENSMUST00000204720 410 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm6842-201ENSMUST00000211361 390 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm39147-201ENSMUST00000211376 465 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
Col28a1Q2UY11 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm7540-201ENSMUST00000219764 926 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 AC163357.1-201ENSMUST00000220847 233 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Col28a1Q2UY11 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
Col28a1Q2UY11 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
Col28a1Q2UY11 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.1□□□□□ -1.91
Col28a1Q2UY11 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.1□□□□□ -1.91
Col28a1Q2UY11 Gm15088-201ENSMUST00000117973 1508 ntBASIC3.1□□□□□ -1.91
Col28a1Q2UY11 Gm15098-201ENSMUST00000119036 1508 ntBASIC3.1□□□□□ -1.91
Col28a1Q2UY11 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.1□□□□□ -1.91
Col28a1Q2UY11 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Col28a1Q2UY11 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Col28a1Q2UY11 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Col28a1Q2UY11 Gm24118-201ENSMUST00000103972 126 ntBASIC3.1□□□□□ -1.91
Col28a1Q2UY11 Gm14581-201ENSMUST00000121726 198 ntBASIC3.1□□□□□ -1.91
Col28a1Q2UY11 Gm27308-201ENSMUST00000184807 233 ntBASIC3.1□□□□□ -1.91
Col28a1Q2UY11 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Col28a1Q2UY11 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.1□□□□□ -1.91
Col28a1Q2UY11 Gm8940-201ENSMUST00000212585 219 ntBASIC3.1□□□□□ -1.91
Col28a1Q2UY11 AC122225.1-201ENSMUST00000215641 369 ntBASIC3.1□□□□□ -1.91
Col28a1Q2UY11 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.1□□□□□ -1.91
Col28a1Q2UY11 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col28a1Q2UY11 Gm23738-201ENSMUST00000082828 171 ntBASIC3.1□□□□□ -1.91
Col28a1Q2UY11 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col28a1Q2UY11 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
Col28a1Q2UY11 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms