Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm44708-201ENSMUST00000205580 2237 ntBASIC4.67□□□□□ -1.66
Col17a1Q07563 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col17a1Q07563 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col17a1Q07563 Gm24120-201ENSMUST00000103978 129 ntBASIC4.67□□□□□ -1.66
Col17a1Q07563 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC4.67□□□□□ -1.66
Col17a1Q07563 Gm22843-201ENSMUST00000157710 134 ntBASIC4.67□□□□□ -1.66
Col17a1Q07563 Mir5127-201ENSMUST00000175295 71 ntBASIC4.67□□□□□ -1.66
Col17a1Q07563 Gm27851-201ENSMUST00000183529 63 ntBASIC4.67□□□□□ -1.66
Col17a1Q07563 Mir7225-201ENSMUST00000184178 54 ntBASIC4.67□□□□□ -1.66
Col17a1Q07563 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC4.67□□□□□ -1.66
Col17a1Q07563 Gm45380-201ENSMUST00000210465 315 ntBASIC4.67□□□□□ -1.66
Col17a1Q07563 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col17a1Q07563 Gm5358-201ENSMUST00000212814 353 ntBASIC4.67□□□□□ -1.66
Col17a1Q07563 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col17a1Q07563 Gm25812-201ENSMUST00000082751 103 ntBASIC4.67□□□□□ -1.66
Col17a1Q07563 Gm22508-201ENSMUST00000082772 110 ntBASIC4.67□□□□□ -1.66
Col17a1Q07563 Gm37602-201ENSMUST00000195187 3310 ntBASIC4.67□□□□□ -1.66
Col17a1Q07563 Gm44679-201ENSMUST00000207202 2908 ntBASIC4.66□□□□□ -1.66
Col17a1Q07563 Gm38071-201ENSMUST00000195792 3378 ntBASIC4.66□□□□□ -1.66
Col17a1Q07563 Gm13122-201ENSMUST00000118380 453 ntBASIC4.66□□□□□ -1.66
Col17a1Q07563 Gm11219-201ENSMUST00000118565 358 ntBASIC4.66□□□□□ -1.66
Col17a1Q07563 Gm13518-201ENSMUST00000120018 233 ntBASIC4.66□□□□□ -1.66
Col17a1Q07563 Gm24836-201ENSMUST00000122609 108 ntBASIC4.66□□□□□ -1.66
Col17a1Q07563 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.66□□□□□ -1.66
Col17a1Q07563 Gm23779-201ENSMUST00000157938 64 ntBASIC4.66□□□□□ -1.66
Col17a1Q07563 Gm23660-201ENSMUST00000178362 79 ntBASIC4.66□□□□□ -1.66
Col17a1Q07563 Gm24088-201ENSMUST00000179100 79 ntBASIC4.66□□□□□ -1.66
Col17a1Q07563 Gm37817-201ENSMUST00000195276 434 ntBASIC4.66□□□□□ -1.66
Col17a1Q07563 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC4.66□□□□□ -1.66
Col17a1Q07563 Gm45005-201ENSMUST00000206640 157 ntBASIC4.66□□□□□ -1.66
Col17a1Q07563 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC4.66□□□□□ -1.66
Col17a1Q07563 Gm45678-201ENSMUST00000210509 295 ntBASIC4.66□□□□□ -1.66
Col17a1Q07563 Gm8940-201ENSMUST00000212585 219 ntBASIC4.66□□□□□ -1.66
Col17a1Q07563 Gm23623-201ENSMUST00000082461 107 ntBASIC4.66□□□□□ -1.66
Col17a1Q07563 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col17a1Q07563 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Col17a1Q07563 Gm24889-201ENSMUST00000104388 132 ntBASIC4.65□□□□□ -1.66
Col17a1Q07563 Gm14013-201ENSMUST00000119006 270 ntBASIC4.65□□□□□ -1.66
Col17a1Q07563 Gm13687-201ENSMUST00000119857 282 ntBASIC4.65□□□□□ -1.66
Col17a1Q07563 Gm11556-201ENSMUST00000120751 288 ntBASIC4.65□□□□□ -1.66
Col17a1Q07563 Gm22988-201ENSMUST00000122759 144 ntBASIC4.65□□□□□ -1.66
Col17a1Q07563 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC4.65□□□□□ -1.66
Col17a1Q07563 Gm24879-201ENSMUST00000158386 143 ntBASIC4.65□□□□□ -1.66
Col17a1Q07563 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Col17a1Q07563 Ear-ps4-201ENSMUST00000166834 450 ntBASIC4.65□□□□□ -1.66
Col17a1Q07563 Gm23289-201ENSMUST00000175615 108 ntBASIC4.65□□□□□ -1.66
Col17a1Q07563 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC4.65□□□□□ -1.66
Col17a1Q07563 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC4.65□□□□□ -1.66
Col17a1Q07563 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Col17a1Q07563 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Col17a1Q07563 Gm26960-201ENSMUST00000182263 412 ntBASIC4.65□□□□□ -1.66
Col17a1Q07563 Gm7871-201ENSMUST00000195346 618 ntBASIC4.65□□□□□ -1.66
Col17a1Q07563 Mir3535-201ENSMUST00000197651 147 ntBASIC4.65□□□□□ -1.66
Col17a1Q07563 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC4.65□□□□□ -1.66
Col17a1Q07563 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col17a1Q07563 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
Col17a1Q07563 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col17a1Q07563 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col17a1Q07563 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col17a1Q07563 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col17a1Q07563 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col17a1Q07563 Gm22716-201ENSMUST00000177596 107 ntBASIC4.64□□□□□ -1.67
Col17a1Q07563 Gm9830-201ENSMUST00000178509 357 ntBASIC4.64□□□□□ -1.67
Col17a1Q07563 Gm26585-201ENSMUST00000180890 630 ntBASIC4.64□□□□□ -1.67
Col17a1Q07563 Gm29014-201ENSMUST00000191422 326 ntBASIC4.64□□□□□ -1.67
Col17a1Q07563 Gm45879-201ENSMUST00000212521 392 ntBASIC4.64□□□□□ -1.67
Col17a1Q07563 CT572985.2-201ENSMUST00000220496 211 ntBASIC4.64□□□□□ -1.67
Col17a1Q07563 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.64□□□□□ -1.67
Col17a1Q07563 Gm22628-201ENSMUST00000082988 107 ntBASIC4.64□□□□□ -1.67
Col17a1Q07563 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col17a1Q07563 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Col17a1Q07563 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.63□□□□□ -1.67
Col17a1Q07563 Gm15844-201ENSMUST00000118016 576 ntBASIC4.63□□□□□ -1.67
Col17a1Q07563 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.63□□□□□ -1.67
Col17a1Q07563 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC4.63□□□□□ -1.67
Col17a1Q07563 Gm25333-201ENSMUST00000158035 246 ntBASIC4.63□□□□□ -1.67
Col17a1Q07563 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.63□□□□□ -1.67
Col17a1Q07563 Mir6355-201ENSMUST00000183687 106 ntBASIC4.63□□□□□ -1.67
Col17a1Q07563 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC4.63□□□□□ -1.67
Col17a1Q07563 Gm42623-201ENSMUST00000197225 379 ntBASIC4.63□□□□□ -1.67
Col17a1Q07563 Gm24610-201ENSMUST00000083270 109 ntBASIC4.63□□□□□ -1.67
Col17a1Q07563 Mir26a-1-201ENSMUST00000083579 90 ntBASIC4.63□□□□□ -1.67
Col17a1Q07563 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Col17a1Q07563 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.63□□□□□ -1.67
Col17a1Q07563 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.63□□□□□ -1.67
Col17a1Q07563 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col17a1Q07563 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Col17a1Q07563 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.62□□□□□ -1.67
Col17a1Q07563 Gm12871-201ENSMUST00000118758 438 ntBASIC4.62□□□□□ -1.67
Col17a1Q07563 Gm14792-201ENSMUST00000119725 258 ntBASIC4.62□□□□□ -1.67
Col17a1Q07563 Gm16100-201ENSMUST00000120489 231 ntBASIC4.62□□□□□ -1.67
Col17a1Q07563 Gm11384-201ENSMUST00000121376 303 ntBASIC4.62□□□□□ -1.67
Col17a1Q07563 Gm14129-201ENSMUST00000122436 291 ntBASIC4.62□□□□□ -1.67
Col17a1Q07563 Gm16355-201ENSMUST00000128606 231 ntBASIC4.62□□□□□ -1.67
Col17a1Q07563 Gm23169-201ENSMUST00000157157 112 ntBASIC4.62□□□□□ -1.67
Col17a1Q07563 Gm25476-201ENSMUST00000175125 185 ntBASIC4.62□□□□□ -1.67
Col17a1Q07563 Mir6363-201ENSMUST00000184880 114 ntBASIC4.62□□□□□ -1.67
Col17a1Q07563 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC4.62□□□□□ -1.67
Col17a1Q07563 Gm43722-201ENSMUST00000196054 124 ntBASIC4.62□□□□□ -1.67
Col17a1Q07563 Gm42526-201ENSMUST00000198956 393 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms