Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm13076-201ENSMUST00000118041 204 ntBASIC4.31□□□□□ -1.72
Col6a1Q04857 Gm5937-201ENSMUST00000119715 643 ntBASIC4.31□□□□□ -1.72
Col6a1Q04857 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC4.31□□□□□ -1.72
Col6a1Q04857 Gm12412-201ENSMUST00000121867 328 ntBASIC4.31□□□□□ -1.72
Col6a1Q04857 Gm24627-201ENSMUST00000122764 138 ntBASIC4.31□□□□□ -1.72
Col6a1Q04857 Gm25436-201ENSMUST00000158275 145 ntBASIC4.31□□□□□ -1.72
Col6a1Q04857 Gm24006-201ENSMUST00000158462 132 ntBASIC4.31□□□□□ -1.72
Col6a1Q04857 Mir6335-201ENSMUST00000184081 98 ntBASIC4.31□□□□□ -1.72
Col6a1Q04857 Gm28339-201ENSMUST00000185845 696 ntBASIC4.31□□□□□ -1.72
Col6a1Q04857 Gm28057-201ENSMUST00000186603 615 ntBASIC4.31□□□□□ -1.72
Col6a1Q04857 Gm28896-201ENSMUST00000188609 696 ntBASIC4.31□□□□□ -1.72
Col6a1Q04857 Gm38107-201ENSMUST00000194873 696 ntBASIC4.31□□□□□ -1.72
Col6a1Q04857 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC4.31□□□□□ -1.72
Col6a1Q04857 Gm45006-201ENSMUST00000206078 690 ntBASIC4.31□□□□□ -1.72
Col6a1Q04857 AC154636.2-201ENSMUST00000222538 161 ntBASIC4.31□□□□□ -1.72
Col6a1Q04857 CT009713.6-201ENSMUST00000223615 294 ntBASIC4.31□□□□□ -1.72
Col6a1Q04857 Mir32-201ENSMUST00000083610 70 ntBASIC4.31□□□□□ -1.72
Col6a1Q04857 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col6a1Q04857 Gm7381-201ENSMUST00000098958 300 ntBASIC4.31□□□□□ -1.72
Col6a1Q04857 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Col6a1Q04857 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Col6a1Q04857 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.31□□□□□ -1.72
Col6a1Q04857 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.31□□□□□ -1.72
Col6a1Q04857 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a1Q04857 AC159193.2-201ENSMUST00000220865 4251 ntBASIC4.3□□□□□ -1.72
Col6a1Q04857 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.3□□□□□ -1.72
Col6a1Q04857 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a1Q04857 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col6a1Q04857 Mir465b-1-201ENSMUST00000103940 79 ntBASIC4.3□□□□□ -1.72
Col6a1Q04857 Gm22784-201ENSMUST00000104088 132 ntBASIC4.3□□□□□ -1.72
Col6a1Q04857 Mir465b-2-201ENSMUST00000104662 79 ntBASIC4.3□□□□□ -1.72
Col6a1Q04857 Gm24839-201ENSMUST00000122602 107 ntBASIC4.3□□□□□ -1.72
Col6a1Q04857 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a1Q04857 Gm25392-201ENSMUST00000157335 297 ntBASIC4.3□□□□□ -1.72
Col6a1Q04857 Gm22766-201ENSMUST00000158372 99 ntBASIC4.3□□□□□ -1.72
Col6a1Q04857 Gm37624-201ENSMUST00000193751 219 ntBASIC4.3□□□□□ -1.72
Col6a1Q04857 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Col6a1Q04857 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC4.3□□□□□ -1.72
Col6a1Q04857 Gm45162-201ENSMUST00000209013 618 ntBASIC4.3□□□□□ -1.72
Col6a1Q04857 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC4.3□□□□□ -1.72
Col6a1Q04857 Gm22685-201ENSMUST00000082848 106 ntBASIC4.3□□□□□ -1.72
Col6a1Q04857 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col6a1Q04857 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.3□□□□□ -1.72
Col6a1Q04857 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a1Q04857 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col6a1Q04857 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col6a1Q04857 Gm26018-201ENSMUST00000104406 128 ntBASIC4.29□□□□□ -1.72
Col6a1Q04857 Gm23532-201ENSMUST00000104569 112 ntBASIC4.29□□□□□ -1.72
Col6a1Q04857 Gm13419-201ENSMUST00000121711 271 ntBASIC4.29□□□□□ -1.72
Col6a1Q04857 Gm25223-201ENSMUST00000158200 110 ntBASIC4.29□□□□□ -1.72
Col6a1Q04857 Gm25835-201ENSMUST00000158917 144 ntBASIC4.29□□□□□ -1.72
Col6a1Q04857 Gm2862-201ENSMUST00000161524 328 ntBASIC4.29□□□□□ -1.72
Col6a1Q04857 Gm37081-201ENSMUST00000192034 196 ntBASIC4.29□□□□□ -1.72
Col6a1Q04857 Gm43651-201ENSMUST00000199796 439 ntBASIC4.29□□□□□ -1.72
Col6a1Q04857 AC155712.1-201ENSMUST00000219704 160 ntBASIC4.29□□□□□ -1.72
Col6a1Q04857 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col6a1Q04857 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC4.29□□□□□ -1.72
Col6a1Q04857 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col6a1Q04857 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a1Q04857 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.29□□□□□ -1.72
Col6a1Q04857 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col6a1Q04857 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col6a1Q04857 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.29□□□□□ -1.72
Col6a1Q04857 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col6a1Q04857 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col6a1Q04857 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Col6a1Q04857 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col6a1Q04857 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Col6a1Q04857 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col6a1Q04857 Gm14537-201ENSMUST00000117464 599 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 Gm14119-201ENSMUST00000119511 235 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 Gm14770-201ENSMUST00000122197 312 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 Gm23184-201ENSMUST00000122594 131 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 Gm23887-201ENSMUST00000122683 172 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 Gm22561-201ENSMUST00000157331 84 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 Gm24885-201ENSMUST00000158783 270 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 Gm17052-201ENSMUST00000165496 289 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 Gm17100-201ENSMUST00000168963 272 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 Mir8106-201ENSMUST00000184520 139 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.28□□□□□ -1.72
Col6a1Q04857 Gm45080-201ENSMUST00000206648 283 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 Gm44600-201ENSMUST00000208540 111 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a1Q04857 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 AC155715.1-201ENSMUST00000213575 463 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 Gm26457-201ENSMUST00000082678 78 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 Snord82-201ENSMUST00000082889 70 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 Gm23297-201ENSMUST00000083184 127 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 Gm22828-201ENSMUST00000083768 107 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 Gm21032-201ENSMUST00000208108 2578 ntBASIC4.28□□□□□ -1.72
Col6a1Q04857 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a1Q04857 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.28□□□□□ -1.72
Col6a1Q04857 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col6a1Q04857 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Col6a1Q04857 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms