Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC3.79□□□□□ -1.8
Msx2Q03358 Gm23584-201ENSMUST00000157655 129 ntBASIC3.79□□□□□ -1.8
Msx2Q03358 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC3.79□□□□□ -1.8
Msx2Q03358 Gm27286-201ENSMUST00000184934 179 ntBASIC3.79□□□□□ -1.8
Msx2Q03358 Gm37300-201ENSMUST00000193327 280 ntBASIC3.79□□□□□ -1.8
Msx2Q03358 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC3.79□□□□□ -1.8
Msx2Q03358 Gm18341-201ENSMUST00000197538 622 ntBASIC3.79□□□□□ -1.8
Msx2Q03358 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.79□□□□□ -1.8
Msx2Q03358 AC174780.1-201ENSMUST00000199415 1107 ntBASIC3.79□□□□□ -1.8
Msx2Q03358 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Msx2Q03358 Gm6240-201ENSMUST00000208014 473 ntBASIC3.79□□□□□ -1.8
Msx2Q03358 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Msx2Q03358 Gm7422-201ENSMUST00000220115 640 ntBASIC3.79□□□□□ -1.8
Msx2Q03358 Gm24705-201ENSMUST00000082808 107 ntBASIC3.79□□□□□ -1.8
Msx2Q03358 Mir302d-201ENSMUST00000083513 66 ntBASIC3.79□□□□□ -1.8
Msx2Q03358 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.79□□□□□ -1.8
Msx2Q03358 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Msx2Q03358 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.79□□□□□ -1.8
Msx2Q03358 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Msx2Q03358 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Msx2Q03358 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
Msx2Q03358 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Msx2Q03358 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Msx2Q03358 Gm23063-201ENSMUST00000102350 93 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 Gm24263-201ENSMUST00000104059 107 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 Gm26273-201ENSMUST00000104180 131 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 Gm26387-201ENSMUST00000104238 132 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 Gm12902-201ENSMUST00000118389 322 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 Gm12550-201ENSMUST00000118478 329 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 Gm7618-201ENSMUST00000121643 171 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 Gm14562-201ENSMUST00000129885 543 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Msx2Q03358 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC3.78□□□□□ -1.8
Msx2Q03358 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.78□□□□□ -1.8
Msx2Q03358 Gm25115-201ENSMUST00000157187 140 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 Gm23782-201ENSMUST00000157939 120 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 Gm24224-201ENSMUST00000158828 258 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 Gm24308-201ENSMUST00000177773 114 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 Gm27805-201ENSMUST00000184513 79 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 Mir6715-201ENSMUST00000184990 57 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.78□□□□□ -1.8
Msx2Q03358 Gm36964-201ENSMUST00000191876 198 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 Gm37431-201ENSMUST00000195102 111 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 Mir465d-201ENSMUST00000196314 58 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.78□□□□□ -1.8
Msx2Q03358 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC3.78□□□□□ -1.8
Msx2Q03358 Gm45651-201ENSMUST00000210857 335 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 AC157476.1-201ENSMUST00000215555 169 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 Gm23042-201ENSMUST00000083866 101 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Msx2Q03358 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.78□□□□□ -1.8
Msx2Q03358 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Msx2Q03358 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Msx2Q03358 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Msx2Q03358 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Msx2Q03358 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
Msx2Q03358 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
Msx2Q03358 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.77□□□□□ -1.81
Msx2Q03358 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
Msx2Q03358 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Msx2Q03358 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
Msx2Q03358 Gm13155-201ENSMUST00000119277 646 ntBASIC3.77□□□□□ -1.81
Msx2Q03358 Gm14922-201ENSMUST00000121131 163 ntBASIC3.77□□□□□ -1.81
Msx2Q03358 Gm8178-201ENSMUST00000121570 646 ntBASIC3.77□□□□□ -1.81
Msx2Q03358 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.77□□□□□ -1.81
Msx2Q03358 Gm24720-201ENSMUST00000157518 166 ntBASIC3.77□□□□□ -1.81
Msx2Q03358 Gm22637-201ENSMUST00000158144 283 ntBASIC3.77□□□□□ -1.81
Msx2Q03358 Mir5121-201ENSMUST00000198528 74 ntBASIC3.77□□□□□ -1.81
Msx2Q03358 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.77□□□□□ -1.81
Msx2Q03358 Gm6051-201ENSMUST00000201529 352 ntBASIC3.77□□□□□ -1.81
Msx2Q03358 Gm34224-201ENSMUST00000204606 364 ntBASIC3.77□□□□□ -1.81
Msx2Q03358 Gm44259-201ENSMUST00000204996 298 ntBASIC3.77□□□□□ -1.81
Msx2Q03358 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC3.77□□□□□ -1.81
Msx2Q03358 Gm45778-201ENSMUST00000211959 153 ntBASIC3.77□□□□□ -1.81
Msx2Q03358 CT485607.2-201ENSMUST00000214650 91 ntBASIC3.77□□□□□ -1.81
Msx2Q03358 AC192091.2-201ENSMUST00000217869 117 ntBASIC3.77□□□□□ -1.81
Msx2Q03358 AC151902.2-201ENSMUST00000226419 301 ntBASIC3.77□□□□□ -1.81
Msx2Q03358 Gm25204-201ENSMUST00000082843 106 ntBASIC3.77□□□□□ -1.81
Msx2Q03358 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Msx2Q03358 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Msx2Q03358 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.77□□□□□ -1.81
Msx2Q03358 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.77□□□□□ -1.81
Msx2Q03358 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
Msx2Q03358 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Msx2Q03358 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Msx2Q03358 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
Msx2Q03358 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
Msx2Q03358 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Msx2Q03358 Gm24544-201ENSMUST00000103862 110 ntBASIC3.76□□□□□ -1.81
Msx2Q03358 Gm23697-201ENSMUST00000103897 110 ntBASIC3.76□□□□□ -1.81
Msx2Q03358 Gm23319-201ENSMUST00000104467 131 ntBASIC3.76□□□□□ -1.81
Msx2Q03358 Gm24469-201ENSMUST00000104487 131 ntBASIC3.76□□□□□ -1.81
Msx2Q03358 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.76□□□□□ -1.81
Msx2Q03358 Gm26476-201ENSMUST00000122618 313 ntBASIC3.76□□□□□ -1.81
Msx2Q03358 Gm22988-201ENSMUST00000122759 144 ntBASIC3.76□□□□□ -1.81
Msx2Q03358 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.76□□□□□ -1.81
Msx2Q03358 Gm26275-201ENSMUST00000157101 268 ntBASIC3.76□□□□□ -1.81
Msx2Q03358 Gm23905-201ENSMUST00000157568 109 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms