Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Mir3103-201ENSMUST00000175474 67 ntBASIC4.15□□□□□ -1.75
Sox1P53783 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.15□□□□□ -1.75
Sox1P53783 Gm25615-201ENSMUST00000177836 94 ntBASIC4.15□□□□□ -1.75
Sox1P53783 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.15□□□□□ -1.75
Sox1P53783 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.15□□□□□ -1.75
Sox1P53783 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.15□□□□□ -1.75
Sox1P53783 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.15□□□□□ -1.75
Sox1P53783 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC4.15□□□□□ -1.75
Sox1P53783 Gm44355-201ENSMUST00000200417 104 ntBASIC4.15□□□□□ -1.75
Sox1P53783 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Sox1P53783 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Sox1P53783 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Sox1P53783 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.15□□□□□ -1.75
Sox1P53783 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Sox1P53783 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.15□□□□□ -1.75
Sox1P53783 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Sox1P53783 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.14□□□□□ -1.75
Sox1P53783 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
Sox1P53783 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.14□□□□□ -1.75
Sox1P53783 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sox1P53783 Gm24116-201ENSMUST00000103975 107 ntBASIC4.14□□□□□ -1.75
Sox1P53783 Gm25539-201ENSMUST00000116886 122 ntBASIC4.14□□□□□ -1.75
Sox1P53783 Gm23990-201ENSMUST00000117031 117 ntBASIC4.14□□□□□ -1.75
Sox1P53783 Gm12261-201ENSMUST00000117499 645 ntBASIC4.14□□□□□ -1.75
Sox1P53783 Gm12902-201ENSMUST00000118389 322 ntBASIC4.14□□□□□ -1.75
Sox1P53783 Gm15613-201ENSMUST00000118396 326 ntBASIC4.14□□□□□ -1.75
Sox1P53783 Gm11204-201ENSMUST00000122438 147 ntBASIC4.14□□□□□ -1.75
Sox1P53783 Gm25071-201ENSMUST00000175232 70 ntBASIC4.14□□□□□ -1.75
Sox1P53783 Gm24308-201ENSMUST00000177773 114 ntBASIC4.14□□□□□ -1.75
Sox1P53783 Mir6418-201ENSMUST00000185075 115 ntBASIC4.14□□□□□ -1.75
Sox1P53783 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC4.14□□□□□ -1.75
Sox1P53783 Gm37001-201ENSMUST00000193377 190 ntBASIC4.14□□□□□ -1.75
Sox1P53783 Gm37361-201ENSMUST00000194345 132 ntBASIC4.14□□□□□ -1.75
Sox1P53783 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC4.14□□□□□ -1.75
Sox1P53783 Gm43749-201ENSMUST00000199345 352 ntBASIC4.14□□□□□ -1.75
Sox1P53783 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Sox1P53783 Gm6796-201ENSMUST00000211919 243 ntBASIC4.14□□□□□ -1.75
Sox1P53783 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Sox1P53783 AC121942.2-201ENSMUST00000223824 600 ntBASIC4.14□□□□□ -1.75
Sox1P53783 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.14□□□□□ -1.75
Sox1P53783 Gm24152-201ENSMUST00000082764 163 ntBASIC4.14□□□□□ -1.75
Sox1P53783 Gm24948-201ENSMUST00000082866 207 ntBASIC4.14□□□□□ -1.75
Sox1P53783 Gm10161-201ENSMUST00000091506 204 ntBASIC4.14□□□□□ -1.75
Sox1P53783 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sox1P53783 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.14□□□□□ -1.75
Sox1P53783 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sox1P53783 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sox1P53783 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sox1P53783 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.14□□□□□ -1.75
Sox1P53783 AC152159.1-201ENSMUST00000226719 2769 ntBASIC4.14□□□□□ -1.75
Sox1P53783 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Sox1P53783 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.13□□□□□ -1.75
Sox1P53783 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.13□□□□□ -1.75
Sox1P53783 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Sox1P53783 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Sox1P53783 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.13□□□□□ -1.75
Sox1P53783 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.13□□□□□ -1.75
Sox1P53783 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox1P53783 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Sox1P53783 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Sox1P53783 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Sox1P53783 Gm11645-201ENSMUST00000121589 649 ntBASIC4.13□□□□□ -1.75
Sox1P53783 Gm13852-201ENSMUST00000122350 242 ntBASIC4.13□□□□□ -1.75
Sox1P53783 Gm10059-201ENSMUST00000131139 171 ntBASIC4.13□□□□□ -1.75
Sox1P53783 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC4.13□□□□□ -1.75
Sox1P53783 Gm22135-201ENSMUST00000158752 108 ntBASIC4.13□□□□□ -1.75
Sox1P53783 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.13□□□□□ -1.75
Sox1P53783 Gm18213-201ENSMUST00000207850 178 ntBASIC4.13□□□□□ -1.75
Sox1P53783 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.13□□□□□ -1.75
Sox1P53783 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox1P53783 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox1P53783 Gm25651-201ENSMUST00000083782 119 ntBASIC4.13□□□□□ -1.75
Sox1P53783 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Sox1P53783 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox1P53783 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Sox1P53783 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.13□□□□□ -1.75
Sox1P53783 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.13□□□□□ -1.75
Sox1P53783 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox1P53783 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Sox1P53783 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Sox1P53783 Gm14803-201ENSMUST00000117163 361 ntBASIC4.12□□□□□ -1.75
Sox1P53783 Gm14782-201ENSMUST00000120151 195 ntBASIC4.12□□□□□ -1.75
Sox1P53783 Gm25391-201ENSMUST00000157342 134 ntBASIC4.12□□□□□ -1.75
Sox1P53783 Gm27285-201ENSMUST00000183875 127 ntBASIC4.12□□□□□ -1.75
Sox1P53783 Gm28627-201ENSMUST00000186141 453 ntBASIC4.12□□□□□ -1.75
Sox1P53783 Gm36189-201ENSMUST00000204113 523 ntBASIC4.12□□□□□ -1.75
Sox1P53783 Gm19908-201ENSMUST00000204684 391 ntBASIC4.12□□□□□ -1.75
Sox1P53783 Gm45907-201ENSMUST00000213023 193 ntBASIC4.12□□□□□ -1.75
Sox1P53783 AC157476.1-201ENSMUST00000215555 169 ntBASIC4.12□□□□□ -1.75
Sox1P53783 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.12□□□□□ -1.75
Sox1P53783 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC4.12□□□□□ -1.75
Sox1P53783 AC160550.3-201ENSMUST00000226818 400 ntBASIC4.12□□□□□ -1.75
Sox1P53783 Gm44230-201ENSMUST00000203032 3550 ntBASIC4.12□□□□□ -1.75
Sox1P53783 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Sox1P53783 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
Sox1P53783 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.12□□□□□ -1.75
Sox1P53783 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Sox1P53783 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.12□□□□□ -1.75
Sox1P53783 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.12□□□□□ -1.75
Sox1P53783 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms