Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm23471-201ENSMUST00000177886 79 ntBASIC1.45□□□□□ -2.18
Cux1P53564 Gm26488-201ENSMUST00000178225 79 ntBASIC1.45□□□□□ -2.18
Cux1P53564 Gm23449-201ENSMUST00000179208 79 ntBASIC1.45□□□□□ -2.18
Cux1P53564 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.45□□□□□ -2.18
Cux1P53564 Gm25221-201ENSMUST00000180051 79 ntBASIC1.45□□□□□ -2.18
Cux1P53564 Gm26960-201ENSMUST00000182263 412 ntBASIC1.45□□□□□ -2.18
Cux1P53564 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Cux1P53564 Gm44058-201ENSMUST00000204335 467 ntBASIC1.45□□□□□ -2.18
Cux1P53564 AC127302.1-201ENSMUST00000215973 1111 ntBASIC1.45□□□□□ -2.18
Cux1P53564 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.45□□□□□ -2.18
Cux1P53564 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC1.45□□□□□ -2.18
Cux1P53564 Gm23247-201ENSMUST00000083373 107 ntBASIC1.45□□□□□ -2.18
Cux1P53564 Gm14918-201ENSMUST00000118153 268 ntBASIC1.45□□□□□ -2.18
Cux1P53564 Gm13577-201ENSMUST00000121365 205 ntBASIC1.45□□□□□ -2.18
Cux1P53564 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.45□□□□□ -2.18
Cux1P53564 Gm14129-201ENSMUST00000122436 291 ntBASIC1.45□□□□□ -2.18
Cux1P53564 Gm20698-201ENSMUST00000175657 233 ntBASIC1.45□□□□□ -2.18
Cux1P53564 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC1.45□□□□□ -2.18
Cux1P53564 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC1.45□□□□□ -2.18
Cux1P53564 AC154262.1-201ENSMUST00000225976 286 ntBASIC1.45□□□□□ -2.18
Cux1P53564 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Cux1P53564 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.45□□□□□ -2.18
Cux1P53564 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
Cux1P53564 Gm22270-201ENSMUST00000104034 132 ntBASIC1.44□□□□□ -2.18
Cux1P53564 Gm25994-201ENSMUST00000175392 101 ntBASIC1.44□□□□□ -2.18
Cux1P53564 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Cux1P53564 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Cux1P53564 Gm27761-201ENSMUST00000184091 131 ntBASIC1.44□□□□□ -2.18
Cux1P53564 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Cux1P53564 Gm44358-201ENSMUST00000196301 98 ntBASIC1.44□□□□□ -2.18
Cux1P53564 Gm44472-201ENSMUST00000204922 943 ntBASIC1.44□□□□□ -2.18
Cux1P53564 Gm44585-201ENSMUST00000207150 607 ntBASIC1.44□□□□□ -2.18
Cux1P53564 Gm18338-201ENSMUST00000222381 560 ntBASIC1.44□□□□□ -2.18
Cux1P53564 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.44□□□□□ -2.18
Cux1P53564 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Cux1P53564 Gm25080-201ENSMUST00000082526 107 ntBASIC1.44□□□□□ -2.18
Cux1P53564 Gm25038-201ENSMUST00000082928 130 ntBASIC1.44□□□□□ -2.18
Cux1P53564 Gm45262-201ENSMUST00000209917 1463 ntBASIC1.43□□□□□ -2.18
Cux1P53564 Gm24579-201ENSMUST00000103964 144 ntBASIC1.43□□□□□ -2.18
Cux1P53564 Gm14879-201ENSMUST00000117308 507 ntBASIC1.43□□□□□ -2.18
Cux1P53564 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC1.43□□□□□ -2.18
Cux1P53564 Gm15659-201ENSMUST00000118881 341 ntBASIC1.43□□□□□ -2.18
Cux1P53564 Gm13239-201ENSMUST00000119920 637 ntBASIC1.43□□□□□ -2.18
Cux1P53564 Gm22755-201ENSMUST00000157143 100 ntBASIC1.43□□□□□ -2.18
Cux1P53564 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.43□□□□□ -2.18
Cux1P53564 Gm2930-201ENSMUST00000170403 474 ntBASIC1.43□□□□□ -2.18
Cux1P53564 Gm33354-201ENSMUST00000195448 906 ntBASIC1.43□□□□□ -2.18
Cux1P53564 AC154296.1-201ENSMUST00000198150 67 ntBASIC1.43□□□□□ -2.18
Cux1P53564 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.43□□□□□ -2.18
Cux1P53564 Gm46994-201ENSMUST00000221523 219 ntBASIC1.43□□□□□ -2.18
Cux1P53564 AC121960.3-201ENSMUST00000227077 623 ntBASIC1.43□□□□□ -2.18
Cux1P53564 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC1.43□□□□□ -2.18
Cux1P53564 Mir301-201ENSMUST00000083655 86 ntBASIC1.43□□□□□ -2.18
Cux1P53564 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.42□□□□□ -2.18
Cux1P53564 Gm23431-201ENSMUST00000104006 107 ntBASIC1.42□□□□□ -2.18
Cux1P53564 Gm14899-201ENSMUST00000118673 548 ntBASIC1.42□□□□□ -2.18
Cux1P53564 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC1.42□□□□□ -2.18
Cux1P53564 Gm25961-201ENSMUST00000157174 135 ntBASIC1.42□□□□□ -2.18
Cux1P53564 Mir7079-201ENSMUST00000184697 69 ntBASIC1.42□□□□□ -2.18
Cux1P53564 Gm27587-201ENSMUST00000185116 163 ntBASIC1.42□□□□□ -2.18
Cux1P53564 Gm29192-201ENSMUST00000190942 377 ntBASIC1.42□□□□□ -2.18
Cux1P53564 Gm43284-201ENSMUST00000200103 253 ntBASIC1.42□□□□□ -2.18
Cux1P53564 CT009764.1-201ENSMUST00000222260 483 ntBASIC1.42□□□□□ -2.18
Cux1P53564 Gm6109-201ENSMUST00000223297 348 ntBASIC1.42□□□□□ -2.18
Cux1P53564 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Cux1P53564 Mir5129-201ENSMUST00000174938 78 ntBASIC1.41□□□□□ -2.18
Cux1P53564 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC1.41□□□□□ -2.18
Cux1P53564 Gm9541-201ENSMUST00000188409 502 ntBASIC1.41□□□□□ -2.18
Cux1P53564 Gm9402-201ENSMUST00000196849 388 ntBASIC1.41□□□□□ -2.18
Cux1P53564 Gm18546-201ENSMUST00000197245 676 ntBASIC1.41□□□□□ -2.18
Cux1P53564 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC1.41□□□□□ -2.18
Cux1P53564 Gm18488-201ENSMUST00000215082 364 ntBASIC1.41□□□□□ -2.18
Cux1P53564 Gm15692-201ENSMUST00000152173 352 ntBASIC1.4□□□□□ -2.18
Cux1P53564 Gm22535-201ENSMUST00000158174 119 ntBASIC1.4□□□□□ -2.18
Cux1P53564 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.18
Cux1P53564 AC161758.1-201ENSMUST00000226123 310 ntBASIC1.4□□□□□ -2.18
Cux1P53564 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.4□□□□□ -2.18
Cux1P53564 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.4□□□□□ -2.19
Cux1P53564 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.4□□□□□ -2.19
Cux1P53564 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
Cux1P53564 Gm12872-201ENSMUST00000121835 320 ntBASIC1.4□□□□□ -2.19
Cux1P53564 Gm14840-201ENSMUST00000122135 594 ntBASIC1.4□□□□□ -2.19
Cux1P53564 n-R5s192-201ENSMUST00000122577 119 ntBASIC1.4□□□□□ -2.19
Cux1P53564 Mir1904-201ENSMUST00000122702 80 ntBASIC1.4□□□□□ -2.19
Cux1P53564 Gm20794-201ENSMUST00000177626 628 ntBASIC1.4□□□□□ -2.19
Cux1P53564 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC1.4□□□□□ -2.19
Cux1P53564 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC1.4□□□□□ -2.19
Cux1P53564 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC1.4□□□□□ -2.19
Cux1P53564 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC1.4□□□□□ -2.19
Cux1P53564 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC1.4□□□□□ -2.19
Cux1P53564 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC1.4□□□□□ -2.19
Cux1P53564 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC1.4□□□□□ -2.19
Cux1P53564 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC1.4□□□□□ -2.19
Cux1P53564 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC1.4□□□□□ -2.19
Cux1P53564 Gm27722-201ENSMUST00000183908 76 ntBASIC1.4□□□□□ -2.19
Cux1P53564 Mir6372-201ENSMUST00000185114 109 ntBASIC1.4□□□□□ -2.19
Cux1P53564 Gm28356-202ENSMUST00000187566 858 ntBASIC1.4□□□□□ -2.19
Cux1P53564 Gm20885-201ENSMUST00000190192 654 ntBASIC1.4□□□□□ -2.19
Cux1P53564 Gm37000-201ENSMUST00000193058 428 ntBASIC1.4□□□□□ -2.19
Cux1P53564 Gm33571-201ENSMUST00000193271 657 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms