Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.15□□□□□ -2.06
Col2a1P28481 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.15□□□□□ -2.06
Col2a1P28481 Gm14915-201ENSMUST00000120747 204 ntBASIC2.15□□□□□ -2.06
Col2a1P28481 Gm25784-201ENSMUST00000122524 81 ntBASIC2.15□□□□□ -2.06
Col2a1P28481 Gm23538-201ENSMUST00000157535 101 ntBASIC2.15□□□□□ -2.06
Col2a1P28481 Mir6382-201ENSMUST00000184055 110 ntBASIC2.15□□□□□ -2.06
Col2a1P28481 Mir496b-201ENSMUST00000184935 113 ntBASIC2.15□□□□□ -2.06
Col2a1P28481 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.15□□□□□ -2.06
Col2a1P28481 Gm43026-201ENSMUST00000202972 325 ntBASIC2.15□□□□□ -2.06
Col2a1P28481 Gm43884-201ENSMUST00000204251 559 ntBASIC2.15□□□□□ -2.06
Col2a1P28481 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.15□□□□□ -2.06
Col2a1P28481 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.15□□□□□ -2.06
Col2a1P28481 Gm18488-201ENSMUST00000215082 364 ntBASIC2.15□□□□□ -2.06
Col2a1P28481 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.15□□□□□ -2.06
Col2a1P28481 Mir19a-201ENSMUST00000083482 82 ntBASIC2.15□□□□□ -2.06
Col2a1P28481 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
Col2a1P28481 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Col2a1P28481 Gm37630-201ENSMUST00000194210 1456 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col2a1P28481 Gm13432-201ENSMUST00000118861 241 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm13082-201ENSMUST00000118877 561 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm11420-201ENSMUST00000120047 402 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC2.14□□□□□ -2.07
Col2a1P28481 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC2.14□□□□□ -2.07
Col2a1P28481 Gm22755-201ENSMUST00000157143 100 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm26159-201ENSMUST00000158968 104 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm27544-201ENSMUST00000185069 155 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm27979-201ENSMUST00000185126 56 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm28404-201ENSMUST00000190242 453 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm37778-201ENSMUST00000191732 190 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm18341-201ENSMUST00000197538 622 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm44609-201ENSMUST00000207157 460 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm45049-201ENSMUST00000207586 591 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm45366-201ENSMUST00000209828 384 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm8125-201ENSMUST00000216602 738 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm19441-201ENSMUST00000221545 330 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 AC116589.4-201ENSMUST00000222390 216 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Ear14-201ENSMUST00000049559 468 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Col2a1P28481 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col2a1P28481 Gm22508-201ENSMUST00000082772 110 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm22683-201ENSMUST00000082854 137 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 n-R5s50-201ENSMUST00000083168 111 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Col2a1P28481 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm11367-201ENSMUST00000117802 120 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm25666-201ENSMUST00000157702 107 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm25069-201ENSMUST00000175238 86 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Mir5098-201ENSMUST00000175320 82 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm4076-201ENSMUST00000179230 965 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2.14□□□□□ -2.07
Col2a1P28481 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Col2a1P28481 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm36953-201ENSMUST00000195295 268 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm42164-201ENSMUST00000198881 379 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm43406-201ENSMUST00000200356 334 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm45614-201ENSMUST00000209994 721 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 AC134254.5-201ENSMUST00000223436 400 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col2a1P28481 Gm25796-201ENSMUST00000082645 163 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm26206-201ENSMUST00000082908 110 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Gm24611-201ENSMUST00000083272 107 ntBASIC2.14□□□□□ -2.07
Col2a1P28481 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col2a1P28481 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Col2a1P28481 Gm25848-201ENSMUST00000116790 144 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Gm14751-201ENSMUST00000117693 222 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Gm14918-201ENSMUST00000118153 268 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Gm12513-201ENSMUST00000118617 352 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Gm12433-201ENSMUST00000119659 255 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC2.13□□□□□ -2.07
Col2a1P28481 Gm12706-201ENSMUST00000121588 698 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Gm7209-201ENSMUST00000122339 333 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Gm22199-201ENSMUST00000122660 126 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC2.13□□□□□ -2.07
Col2a1P28481 Gm22563-201ENSMUST00000157333 269 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Gm23124-201ENSMUST00000157650 107 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Gm22716-201ENSMUST00000177596 107 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC2.13□□□□□ -2.07
Col2a1P28481 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
Col2a1P28481 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Col2a1P28481 Gm26701-201ENSMUST00000181571 234 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Gm27957-201ENSMUST00000184054 127 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Gm37869-201ENSMUST00000193385 595 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Ighv1-6-201ENSMUST00000193849 293 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Gm9227-201ENSMUST00000194733 566 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Gm20039-201ENSMUST00000210329 394 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.13□□□□□ -2.07
Col2a1P28481 Gm35558-203ENSMUST00000222264 204 ntBASIC2.13□□□□□ -2.07
Col2a1P28481 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 110.9 ms