Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Mir669j-201ENSMUST00000179023 121 ntBASIC4.1□□□□□ -1.75
Hoxd9P28357 Mir7047-201ENSMUST00000184595 64 ntBASIC4.1□□□□□ -1.75
Hoxd9P28357 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Hoxd9P28357 Gm28500-201ENSMUST00000190286 151 ntBASIC4.1□□□□□ -1.75
Hoxd9P28357 Gm38298-201ENSMUST00000193578 118 ntBASIC4.1□□□□□ -1.75
Hoxd9P28357 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.1□□□□□ -1.75
Hoxd9P28357 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC4.1□□□□□ -1.75
Hoxd9P28357 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.1□□□□□ -1.75
Hoxd9P28357 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC4.1□□□□□ -1.75
Hoxd9P28357 Gm45492-201ENSMUST00000211611 288 ntBASIC4.1□□□□□ -1.75
Hoxd9P28357 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Hoxd9P28357 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Hoxd9P28357 mt-Tt-201ENSMUST00000082422 67 ntBASIC4.1□□□□□ -1.75
Hoxd9P28357 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.1□□□□□ -1.75
Hoxd9P28357 Gm22681-201ENSMUST00000083853 106 ntBASIC4.1□□□□□ -1.75
Hoxd9P28357 Gm10172-201ENSMUST00000085929 558 ntBASIC4.1□□□□□ -1.75
Hoxd9P28357 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC4.1□□□□□ -1.75
Hoxd9P28357 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Hoxd9P28357 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Hoxd9P28357 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Hoxd9P28357 Gm37941-201ENSMUST00000192170 2309 ntBASIC4.1□□□□□ -1.75
Hoxd9P28357 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Hoxd9P28357 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
Hoxd9P28357 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Hoxd9P28357 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Hoxd9P28357 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.09□□□□□ -1.75
Hoxd9P28357 Gm13567-201ENSMUST00000118026 247 ntBASIC4.09□□□□□ -1.75
Hoxd9P28357 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC4.09□□□□□ -1.75
Hoxd9P28357 Gm13797-201ENSMUST00000121792 120 ntBASIC4.09□□□□□ -1.75
Hoxd9P28357 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.09□□□□□ -1.75
Hoxd9P28357 Gm25961-201ENSMUST00000157174 135 ntBASIC4.09□□□□□ -1.75
Hoxd9P28357 Gm22883-201ENSMUST00000157376 106 ntBASIC4.09□□□□□ -1.75
Hoxd9P28357 Gm25889-201ENSMUST00000157775 107 ntBASIC4.09□□□□□ -1.75
Hoxd9P28357 Gm23817-201ENSMUST00000158449 104 ntBASIC4.09□□□□□ -1.75
Hoxd9P28357 Gm2389-201ENSMUST00000160487 189 ntBASIC4.09□□□□□ -1.75
Hoxd9P28357 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.09□□□□□ -1.75
Hoxd9P28357 Mir6338-201ENSMUST00000183389 109 ntBASIC4.09□□□□□ -1.75
Hoxd9P28357 Gm28848-201ENSMUST00000189984 168 ntBASIC4.09□□□□□ -1.75
Hoxd9P28357 Gm37050-201ENSMUST00000193464 466 ntBASIC4.09□□□□□ -1.75
Hoxd9P28357 Gm18462-201ENSMUST00000208112 417 ntBASIC4.09□□□□□ -1.75
Hoxd9P28357 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.09□□□□□ -1.75
Hoxd9P28357 Gm35405-201ENSMUST00000218754 400 ntBASIC4.09□□□□□ -1.75
Hoxd9P28357 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.09□□□□□ -1.75
Hoxd9P28357 Mir21a-201ENSMUST00000083521 92 ntBASIC4.09□□□□□ -1.75
Hoxd9P28357 Mir346-201ENSMUST00000083547 98 ntBASIC4.09□□□□□ -1.75
Hoxd9P28357 Synpr-207ENSMUST00000223583 3362 ntBASIC4.09□□□□□ -1.76
Hoxd9P28357 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Hoxd9P28357 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Hoxd9P28357 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Hoxd9P28357 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Hoxd9P28357 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Hoxd9P28357 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd9P28357 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd9P28357 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd9P28357 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd9P28357 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd9P28357 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Hoxd9P28357 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd9P28357 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Hoxd9P28357 Mir105-201ENSMUST00000104655 80 ntBASIC4.08□□□□□ -1.76
Hoxd9P28357 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Hoxd9P28357 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.08□□□□□ -1.76
Hoxd9P28357 Gm10059-201ENSMUST00000131139 171 ntBASIC4.08□□□□□ -1.76
Hoxd9P28357 Gm22320-201ENSMUST00000157149 312 ntBASIC4.08□□□□□ -1.76
Hoxd9P28357 Gm24552-201ENSMUST00000158646 103 ntBASIC4.08□□□□□ -1.76
Hoxd9P28357 Gm23337-201ENSMUST00000158959 118 ntBASIC4.08□□□□□ -1.76
Hoxd9P28357 Gm27220-201ENSMUST00000183453 262 ntBASIC4.08□□□□□ -1.76
Hoxd9P28357 Gm27457-201ENSMUST00000184771 156 ntBASIC4.08□□□□□ -1.76
Hoxd9P28357 Mir7062-201ENSMUST00000185038 66 ntBASIC4.08□□□□□ -1.76
Hoxd9P28357 Gm6802-202ENSMUST00000186566 126 ntBASIC4.08□□□□□ -1.76
Hoxd9P28357 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.08□□□□□ -1.76
Hoxd9P28357 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.08□□□□□ -1.76
Hoxd9P28357 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.08□□□□□ -1.76
Hoxd9P28357 Gm40810-201ENSMUST00000219149 253 ntBASIC4.08□□□□□ -1.76
Hoxd9P28357 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.08□□□□□ -1.76
Hoxd9P28357 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.08□□□□□ -1.76
Hoxd9P28357 Gm25136-201ENSMUST00000083253 115 ntBASIC4.08□□□□□ -1.76
Hoxd9P28357 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.08□□□□□ -1.76
Hoxd9P28357 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Hoxd9P28357 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.08□□□□□ -1.76
Hoxd9P28357 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.07□□□□□ -1.76
Hoxd9P28357 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.07□□□□□ -1.76
Hoxd9P28357 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Hoxd9P28357 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Hoxd9P28357 Gm14916-201ENSMUST00000121904 204 ntBASIC4.07□□□□□ -1.76
Hoxd9P28357 Gm25045-201ENSMUST00000122670 99 ntBASIC4.07□□□□□ -1.76
Hoxd9P28357 Gm23182-201ENSMUST00000158688 135 ntBASIC4.07□□□□□ -1.76
Hoxd9P28357 Mir6960-201ENSMUST00000183449 61 ntBASIC4.07□□□□□ -1.76
Hoxd9P28357 Mir7074-201ENSMUST00000183884 63 ntBASIC4.07□□□□□ -1.76
Hoxd9P28357 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.07□□□□□ -1.76
Hoxd9P28357 Gm42844-201ENSMUST00000200355 112 ntBASIC4.07□□□□□ -1.76
Hoxd9P28357 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Hoxd9P28357 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.07□□□□□ -1.76
Hoxd9P28357 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC4.07□□□□□ -1.76
Hoxd9P28357 CU062626.2-201ENSMUST00000223953 274 ntBASIC4.07□□□□□ -1.76
Hoxd9P28357 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC4.07□□□□□ -1.76
Hoxd9P28357 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.07□□□□□ -1.76
Hoxd9P28357 Snord22-201ENSMUST00000083153 126 ntBASIC4.07□□□□□ -1.76
Hoxd9P28357 Gm26121-201ENSMUST00000083364 162 ntBASIC4.07□□□□□ -1.76
Hoxd9P28357 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms