Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm2436-201ENSMUST00000219562 774 ntBASIC1.79□□□□□ -2.12
Sdc1P18828 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.79□□□□□ -2.12
Sdc1P18828 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.79□□□□□ -2.12
Sdc1P18828 AC120553.1-201ENSMUST00000227313 260 ntBASIC1.79□□□□□ -2.12
Sdc1P18828 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.79□□□□□ -2.12
Sdc1P18828 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
Sdc1P18828 Gm23615-201ENSMUST00000082602 65 ntBASIC1.79□□□□□ -2.12
Sdc1P18828 Gm23246-201ENSMUST00000083371 67 ntBASIC1.79□□□□□ -2.12
Sdc1P18828 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Sdc1P18828 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Sdc1P18828 Gm24127-201ENSMUST00000104110 130 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Gm22591-201ENSMUST00000104243 106 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Gm14887-201ENSMUST00000119522 663 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Gm14845-201ENSMUST00000121259 306 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Gm25325-201ENSMUST00000122559 86 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Gm24937-201ENSMUST00000122597 134 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Gm25460-201ENSMUST00000157954 127 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Gm24770-201ENSMUST00000158505 92 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Gm25711-201ENSMUST00000158633 128 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Gm9593-201ENSMUST00000166034 469 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Gm20543-201ENSMUST00000174200 726 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Gm24168-201ENSMUST00000178825 107 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Gm29452-201ENSMUST00000187996 313 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Gm28860-201ENSMUST00000188103 313 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Gm18403-201ENSMUST00000192907 529 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Trbv18-201ENSMUST00000194256 294 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Gm44990-201ENSMUST00000203922 217 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC1.78□□□□□ -2.12
Sdc1P18828 Gm9377-201ENSMUST00000207227 623 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.78□□□□□ -2.12
Sdc1P18828 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Sdc1P18828 AC102291.2-201ENSMUST00000228083 367 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC1.78□□□□□ -2.12
Sdc1P18828 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Sdc1P18828 Gm22806-201ENSMUST00000082738 136 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Gm22229-201ENSMUST00000082987 108 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Mir300-201ENSMUST00000083485 79 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Mir463-201ENSMUST00000093570 75 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Mir452-201ENSMUST00000093629 85 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.78□□□□□ -2.12
Sdc1P18828 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Sdc1P18828 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.77□□□□□ -2.13
Sdc1P18828 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Sdc1P18828 Gm23202-201ENSMUST00000104376 129 ntBASIC1.77□□□□□ -2.13
Sdc1P18828 Gm15215-201ENSMUST00000117773 489 ntBASIC1.77□□□□□ -2.13
Sdc1P18828 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC1.77□□□□□ -2.13
Sdc1P18828 Gm12934-201ENSMUST00000119221 343 ntBASIC1.77□□□□□ -2.13
Sdc1P18828 Gm7327-201ENSMUST00000120925 652 ntBASIC1.77□□□□□ -2.13
Sdc1P18828 Gm23885-201ENSMUST00000122682 294 ntBASIC1.77□□□□□ -2.13
Sdc1P18828 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.77□□□□□ -2.13
Sdc1P18828 Gm22076-201ENSMUST00000158601 84 ntBASIC1.77□□□□□ -2.13
Sdc1P18828 Gm22093-201ENSMUST00000158980 111 ntBASIC1.77□□□□□ -2.13
Sdc1P18828 Gm9022-202ENSMUST00000183285 483 ntBASIC1.77□□□□□ -2.13
Sdc1P18828 Mir7658-201ENSMUST00000184043 57 ntBASIC1.77□□□□□ -2.13
Sdc1P18828 Gm44161-201ENSMUST00000203532 253 ntBASIC1.77□□□□□ -2.13
Sdc1P18828 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Sdc1P18828 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC1.77□□□□□ -2.13
Sdc1P18828 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.77□□□□□ -2.13
Sdc1P18828 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Sdc1P18828 Gm25788-201ENSMUST00000082721 131 ntBASIC1.77□□□□□ -2.13
Sdc1P18828 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.77□□□□□ -2.13
Sdc1P18828 Gm45558-201ENSMUST00000209384 1895 ntBASIC1.77□□□□□ -2.13
Sdc1P18828 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.76□□□□□ -2.13
Sdc1P18828 Gm12598-201ENSMUST00000117333 830 ntBASIC1.76□□□□□ -2.13
Sdc1P18828 Gm13756-201ENSMUST00000117618 222 ntBASIC1.76□□□□□ -2.13
Sdc1P18828 Gm12235-201ENSMUST00000118596 170 ntBASIC1.76□□□□□ -2.13
Sdc1P18828 Gm13443-201ENSMUST00000120770 555 ntBASIC1.76□□□□□ -2.13
Sdc1P18828 Gm26027-201ENSMUST00000122725 268 ntBASIC1.76□□□□□ -2.13
Sdc1P18828 Gm23381-201ENSMUST00000157676 94 ntBASIC1.76□□□□□ -2.13
Sdc1P18828 Gm27396-201ENSMUST00000157708 58 ntBASIC1.76□□□□□ -2.13
Sdc1P18828 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Sdc1P18828 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Sdc1P18828 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.76□□□□□ -2.13
Sdc1P18828 AC121844.1-201ENSMUST00000218706 137 ntBASIC1.76□□□□□ -2.13
Sdc1P18828 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.76□□□□□ -2.13
Sdc1P18828 AC156560.1-201ENSMUST00000221425 256 ntBASIC1.76□□□□□ -2.13
Sdc1P18828 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.76□□□□□ -2.13
Sdc1P18828 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.76□□□□□ -2.13
Sdc1P18828 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.76□□□□□ -2.13
Sdc1P18828 Gm24045-201ENSMUST00000083113 98 ntBASIC1.76□□□□□ -2.13
Sdc1P18828 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Sdc1P18828 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Sdc1P18828 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Sdc1P18828 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Sdc1P18828 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Sdc1P18828 Gm24403-201ENSMUST00000104616 130 ntBASIC1.75□□□□□ -2.13
Sdc1P18828 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Sdc1P18828 Gm25539-201ENSMUST00000116886 122 ntBASIC1.75□□□□□ -2.13
Sdc1P18828 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.75□□□□□ -2.13
Sdc1P18828 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Sdc1P18828 Gm23586-201ENSMUST00000157657 123 ntBASIC1.75□□□□□ -2.13
Sdc1P18828 Gm23865-201ENSMUST00000157723 97 ntBASIC1.75□□□□□ -2.13
Sdc1P18828 Gm26215-201ENSMUST00000158584 139 ntBASIC1.75□□□□□ -2.13
Sdc1P18828 Gm24053-201ENSMUST00000158620 105 ntBASIC1.75□□□□□ -2.13
Sdc1P18828 Gm25488-201ENSMUST00000158728 118 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 320.9 ms