Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.29□□□□□ -1.72
RaraP11416 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.29□□□□□ -1.72
RaraP11416 Mir6383-201ENSMUST00000184545 116 ntBASIC4.29□□□□□ -1.72
RaraP11416 Gm29597-201ENSMUST00000188035 308 ntBASIC4.29□□□□□ -1.72
RaraP11416 Gm45778-201ENSMUST00000211959 153 ntBASIC4.29□□□□□ -1.72
RaraP11416 AC157476.1-201ENSMUST00000215555 169 ntBASIC4.29□□□□□ -1.72
RaraP11416 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.29□□□□□ -1.72
RaraP11416 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC4.29□□□□□ -1.72
RaraP11416 Mir193a-201ENSMUST00000083461 66 ntBASIC4.29□□□□□ -1.72
RaraP11416 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
RaraP11416 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
RaraP11416 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RaraP11416 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.29□□□□□ -1.72
RaraP11416 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RaraP11416 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RaraP11416 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
RaraP11416 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RaraP11416 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
RaraP11416 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RaraP11416 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RaraP11416 Gm26273-201ENSMUST00000104180 131 ntBASIC4.28□□□□□ -1.72
RaraP11416 Gm24282-201ENSMUST00000104232 66 ntBASIC4.28□□□□□ -1.72
RaraP11416 Gm13419-201ENSMUST00000121711 271 ntBASIC4.28□□□□□ -1.72
RaraP11416 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.28□□□□□ -1.72
RaraP11416 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC4.28□□□□□ -1.72
RaraP11416 Gm26275-201ENSMUST00000157101 268 ntBASIC4.28□□□□□ -1.72
RaraP11416 Gm23231-201ENSMUST00000157299 104 ntBASIC4.28□□□□□ -1.72
RaraP11416 Gm25391-201ENSMUST00000157342 134 ntBASIC4.28□□□□□ -1.72
RaraP11416 Gm24014-201ENSMUST00000157728 157 ntBASIC4.28□□□□□ -1.72
RaraP11416 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.28□□□□□ -1.72
RaraP11416 Gm29479-201ENSMUST00000190352 455 ntBASIC4.28□□□□□ -1.72
RaraP11416 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.28□□□□□ -1.72
RaraP11416 Gm42451-201ENSMUST00000197410 244 ntBASIC4.28□□□□□ -1.72
RaraP11416 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.28□□□□□ -1.72
RaraP11416 Gm44520-201ENSMUST00000205447 802 ntBASIC4.28□□□□□ -1.72
RaraP11416 Gm44519-201ENSMUST00000206486 122 ntBASIC4.28□□□□□ -1.72
RaraP11416 Gm25813-201ENSMUST00000082748 191 ntBASIC4.28□□□□□ -1.72
RaraP11416 Gm24950-201ENSMUST00000082768 191 ntBASIC4.28□□□□□ -1.72
RaraP11416 Gm23971-201ENSMUST00000083317 191 ntBASIC4.28□□□□□ -1.72
RaraP11416 Mir302d-201ENSMUST00000083513 66 ntBASIC4.28□□□□□ -1.72
RaraP11416 Gm23849-201ENSMUST00000083833 191 ntBASIC4.28□□□□□ -1.72
RaraP11416 Gm26316-201ENSMUST00000083886 191 ntBASIC4.28□□□□□ -1.72
RaraP11416 Rnu2-10-201ENSMUST00000084010 191 ntBASIC4.28□□□□□ -1.72
RaraP11416 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.28□□□□□ -1.72
RaraP11416 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RaraP11416 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RaraP11416 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RaraP11416 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RaraP11416 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RaraP11416 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RaraP11416 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
RaraP11416 Gm42482-201ENSMUST00000198904 1947 ntBASIC4.27□□□□□ -1.73
RaraP11416 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RaraP11416 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RaraP11416 Mir1942-201ENSMUST00000157274 63 ntBASIC4.27□□□□□ -1.73
RaraP11416 Mir1967-201ENSMUST00000157789 82 ntBASIC4.27□□□□□ -1.73
RaraP11416 Gm24131-201ENSMUST00000158539 107 ntBASIC4.27□□□□□ -1.73
RaraP11416 Mir7074-201ENSMUST00000183884 63 ntBASIC4.27□□□□□ -1.73
RaraP11416 AC100209.2-201ENSMUST00000224461 451 ntBASIC4.27□□□□□ -1.73
RaraP11416 AC160550.3-201ENSMUST00000226818 400 ntBASIC4.27□□□□□ -1.73
RaraP11416 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RaraP11416 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RaraP11416 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RaraP11416 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RaraP11416 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RaraP11416 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RaraP11416 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RaraP11416 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.27□□□□□ -1.73
RaraP11416 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RaraP11416 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
RaraP11416 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RaraP11416 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.26□□□□□ -1.73
RaraP11416 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RaraP11416 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RaraP11416 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RaraP11416 Gm8840-201ENSMUST00000122454 386 ntBASIC4.26□□□□□ -1.73
RaraP11416 Gm16327-201ENSMUST00000137146 228 ntBASIC4.26□□□□□ -1.73
RaraP11416 Gm23905-201ENSMUST00000157568 109 ntBASIC4.26□□□□□ -1.73
RaraP11416 Gm23586-201ENSMUST00000157657 123 ntBASIC4.26□□□□□ -1.73
RaraP11416 Gm22537-201ENSMUST00000158172 199 ntBASIC4.26□□□□□ -1.73
RaraP11416 Gm27761-201ENSMUST00000184091 131 ntBASIC4.26□□□□□ -1.73
RaraP11416 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.26□□□□□ -1.73
RaraP11416 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC4.26□□□□□ -1.73
RaraP11416 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RaraP11416 Gm38088-201ENSMUST00000195829 241 ntBASIC4.26□□□□□ -1.73
RaraP11416 Gm44337-201ENSMUST00000196553 114 ntBASIC4.26□□□□□ -1.73
RaraP11416 Gm17951-201ENSMUST00000198536 496 ntBASIC4.26□□□□□ -1.73
RaraP11416 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.26□□□□□ -1.73
RaraP11416 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.26□□□□□ -1.73
RaraP11416 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.26□□□□□ -1.73
RaraP11416 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RaraP11416 Gm26495-201ENSMUST00000083152 137 ntBASIC4.26□□□□□ -1.73
RaraP11416 Gm22297-201ENSMUST00000083312 106 ntBASIC4.26□□□□□ -1.73
RaraP11416 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.26□□□□□ -1.73
RaraP11416 Gm45662-201ENSMUST00000210054 2098 ntBASIC4.26□□□□□ -1.73
RaraP11416 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
RaraP11416 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
RaraP11416 Gm44049-201ENSMUST00000204905 2984 ntBASIC4.26□□□□□ -1.73
RaraP11416 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.25□□□□□ -1.73
RaraP11416 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 900.3 ms