Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm43541-201ENSMUST00000197208 581 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Gm42164-201ENSMUST00000198881 379 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Col5a1O88207 AC167977.1-201ENSMUST00000221384 234 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Gm25586-201ENSMUST00000082499 112 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Col5a1O88207 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Col5a1O88207 Mir883a-201ENSMUST00000104824 76 ntBASIC1.67□□□□□ -2.14
Col5a1O88207 Gm7123-201ENSMUST00000117647 213 ntBASIC1.67□□□□□ -2.14
Col5a1O88207 Gm14815-201ENSMUST00000120060 488 ntBASIC1.67□□□□□ -2.14
Col5a1O88207 Gm15112-201ENSMUST00000120152 860 ntBASIC1.67□□□□□ -2.14
Col5a1O88207 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Col5a1O88207 Gm13424-201ENSMUST00000122301 354 ntBASIC1.67□□□□□ -2.14
Col5a1O88207 Gm22208-201ENSMUST00000122658 110 ntBASIC1.67□□□□□ -2.14
Col5a1O88207 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Col5a1O88207 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC1.67□□□□□ -2.14
Col5a1O88207 Gm23981-201ENSMUST00000157136 106 ntBASIC1.67□□□□□ -2.14
Col5a1O88207 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.67□□□□□ -2.14
Col5a1O88207 Gm18356-201ENSMUST00000185677 623 ntBASIC1.67□□□□□ -2.14
Col5a1O88207 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Col5a1O88207 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Col5a1O88207 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Col5a1O88207 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC1.67□□□□□ -2.14
Col5a1O88207 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.67□□□□□ -2.14
Col5a1O88207 Gm42960-201ENSMUST00000202160 241 ntBASIC1.67□□□□□ -2.14
Col5a1O88207 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC1.67□□□□□ -2.14
Col5a1O88207 Gm44266-201ENSMUST00000205235 500 ntBASIC1.67□□□□□ -2.14
Col5a1O88207 Gm29754-201ENSMUST00000206269 358 ntBASIC1.67□□□□□ -2.14
Col5a1O88207 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC1.67□□□□□ -2.14
Col5a1O88207 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC1.67□□□□□ -2.14
Col5a1O88207 AC109214.2-201ENSMUST00000220089 358 ntBASIC1.67□□□□□ -2.14
Col5a1O88207 CT030184.1-201ENSMUST00000222393 416 ntBASIC1.67□□□□□ -2.14
Col5a1O88207 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Col5a1O88207 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Col5a1O88207 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Col5a1O88207 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Col5a1O88207 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Col5a1O88207 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
Col5a1O88207 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Col5a1O88207 Gm24984-201ENSMUST00000104454 133 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm25507-201ENSMUST00000116981 144 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm13082-201ENSMUST00000118877 561 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm14566-201ENSMUST00000118915 321 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm14731-201ENSMUST00000119216 376 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm11359-201ENSMUST00000120039 567 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC1.66□□□□□ -2.14
Col5a1O88207 Gm23352-201ENSMUST00000158428 64 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Ear-ps3-201ENSMUST00000168308 445 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm24315-201ENSMUST00000177835 127 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm27676-201ENSMUST00000183669 61 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm28927-201ENSMUST00000191528 272 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC1.66□□□□□ -2.14
Col5a1O88207 Gm43114-201ENSMUST00000198298 343 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm43487-201ENSMUST00000200331 1031 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm44910-201ENSMUST00000208451 396 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm19032-201ENSMUST00000208584 592 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC1.66□□□□□ -2.14
Col5a1O88207 Gm46994-201ENSMUST00000221523 219 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm10038-201ENSMUST00000077233 441 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm24610-201ENSMUST00000083270 109 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm25126-201ENSMUST00000083343 102 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Col5a1O88207 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
Col5a1O88207 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm37331-201ENSMUST00000192367 3375 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Col5a1O88207 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Col5a1O88207 Gm25563-201ENSMUST00000104603 74 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm25848-201ENSMUST00000116790 144 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm16431-201ENSMUST00000117454 431 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm13482-201ENSMUST00000119842 254 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm6591-201ENSMUST00000121063 434 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm12926-201ENSMUST00000121158 409 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm14366-201ENSMUST00000121970 730 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm6568-201ENSMUST00000122274 697 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm24546-201ENSMUST00000158652 102 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Col5a1O88207 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm25451-201ENSMUST00000177832 121 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC1.66□□□□□ -2.14
Col5a1O88207 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC1.66□□□□□ -2.14
Col5a1O88207 Gm23186-201ENSMUST00000180078 107 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm28343-201ENSMUST00000185386 112 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm29389-201ENSMUST00000191562 352 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC1.66□□□□□ -2.14
Col5a1O88207 Gm42506-201ENSMUST00000202009 150 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC1.66□□□□□ -2.14
Col5a1O88207 AC125531.1-201ENSMUST00000219849 221 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Olfr1193-201ENSMUST00000081697 957 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm25859-201ENSMUST00000083710 91 ntBASIC1.66□□□□□ -2.14
Col5a1O88207 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC1.66□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms