Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm24997-201ENSMUST00000157910 105 ntBASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 Gm22637-201ENSMUST00000158144 283 ntBASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 Gm27476-201ENSMUST00000183366 104 ntBASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 Mir6391-201ENSMUST00000184391 104 ntBASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 Gm27540-201ENSMUST00000184950 187 ntBASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 Gm42526-201ENSMUST00000198956 393 ntBASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 Gm6842-201ENSMUST00000211361 390 ntBASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 AC115735.2-201ENSMUST00000227135 351 ntBASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 Gm23517-201ENSMUST00000082830 192 ntBASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 Gm23099-201ENSMUST00000083454 139 ntBASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 Gm25896-201ENSMUST00000083713 136 ntBASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.53□□□□□ -1.85
Pcdh1F7BJK1 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
Pcdh1F7BJK1 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
Pcdh1F7BJK1 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm12902-201ENSMUST00000118389 322 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm11819-201ENSMUST00000122192 372 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm25177-201ENSMUST00000122634 117 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm25913-201ENSMUST00000157617 135 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm22789-201ENSMUST00000157884 130 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm23219-201ENSMUST00000158123 87 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm24666-201ENSMUST00000158937 167 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm2862-201ENSMUST00000161524 328 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm22398-201ENSMUST00000174941 125 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm25731-201ENSMUST00000175167 125 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm23152-201ENSMUST00000175322 116 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm23002-201ENSMUST00000179221 107 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm22450-201ENSMUST00000179641 107 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm25024-201ENSMUST00000179667 104 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm25473-201ENSMUST00000180191 107 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Mir6996-201ENSMUST00000183922 61 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm27828-201ENSMUST00000184108 119 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Mir6899-201ENSMUST00000184798 64 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Mir6540-201ENSMUST00000184886 108 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm37361-201ENSMUST00000194345 132 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm43402-201ENSMUST00000197159 159 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Igkv13-76-201ENSMUST00000197621 347 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm5358-201ENSMUST00000212814 353 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 AC159896.1-201ENSMUST00000215264 215 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm5175-202ENSMUST00000219699 529 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm26071-201ENSMUST00000083261 107 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm24521-201ENSMUST00000083958 107 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm8935-202ENSMUST00000105727 1959 ntBASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Pcdh1F7BJK1 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Pcdh1F7BJK1 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Pcdh1F7BJK1 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Pcdh1F7BJK1 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.51□□□□□ -1.85
Pcdh1F7BJK1 Gm12884-201ENSMUST00000120371 325 ntBASIC3.51□□□□□ -1.85
Pcdh1F7BJK1 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.51□□□□□ -1.85
Pcdh1F7BJK1 Gm24006-201ENSMUST00000158462 132 ntBASIC3.51□□□□□ -1.85
Pcdh1F7BJK1 Gm24739-201ENSMUST00000158855 292 ntBASIC3.51□□□□□ -1.85
Pcdh1F7BJK1 Gm24308-201ENSMUST00000177773 114 ntBASIC3.51□□□□□ -1.85
Pcdh1F7BJK1 Gm5329-201ENSMUST00000186898 463 ntBASIC3.51□□□□□ -1.85
Pcdh1F7BJK1 Gm38356-201ENSMUST00000194313 408 ntBASIC3.51□□□□□ -1.85
Pcdh1F7BJK1 Gm44519-201ENSMUST00000206486 122 ntBASIC3.51□□□□□ -1.85
Pcdh1F7BJK1 Gm45420-201ENSMUST00000211243 425 ntBASIC3.51□□□□□ -1.85
Pcdh1F7BJK1 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.51□□□□□ -1.85
Pcdh1F7BJK1 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.51□□□□□ -1.85
Pcdh1F7BJK1 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Pcdh1F7BJK1 Gm24817-201ENSMUST00000093672 105 ntBASIC3.51□□□□□ -1.85
Pcdh1F7BJK1 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Pcdh1F7BJK1 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Pcdh1F7BJK1 Gm23319-201ENSMUST00000104467 131 ntBASIC3.5□□□□□ -1.85
Pcdh1F7BJK1 Snora64-201ENSMUST00000104521 134 ntBASIC3.5□□□□□ -1.85
Pcdh1F7BJK1 Gm12071-201ENSMUST00000121968 469 ntBASIC3.5□□□□□ -1.85
Pcdh1F7BJK1 Gm22027-201ENSMUST00000122737 127 ntBASIC3.5□□□□□ -1.85
Pcdh1F7BJK1 Mir1942-201ENSMUST00000157274 63 ntBASIC3.5□□□□□ -1.85
Pcdh1F7BJK1 Gm23782-201ENSMUST00000157939 120 ntBASIC3.5□□□□□ -1.85
Pcdh1F7BJK1 Gm26036-201ENSMUST00000158149 144 ntBASIC3.5□□□□□ -1.85
Pcdh1F7BJK1 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Pcdh1F7BJK1 Gm27580-201ENSMUST00000183666 149 ntBASIC3.5□□□□□ -1.85
Pcdh1F7BJK1 Gm29022-201ENSMUST00000190702 225 ntBASIC3.5□□□□□ -1.85
Pcdh1F7BJK1 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC3.5□□□□□ -1.85
Pcdh1F7BJK1 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Pcdh1F7BJK1 Gm18462-201ENSMUST00000208112 417 ntBASIC3.5□□□□□ -1.85
Pcdh1F7BJK1 Gm35857-201ENSMUST00000212739 178 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms