Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Gm14915-201ENSMUST00000120747 204 ntBASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Gm25621-201ENSMUST00000157223 114 ntBASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Gm26348-201ENSMUST00000157528 240 ntBASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Gm24780-201ENSMUST00000157635 143 ntBASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Gm22803-201ENSMUST00000158049 283 ntBASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Ear-ps8-201ENSMUST00000161935 354 ntBASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Gm16162-201ENSMUST00000162296 297 ntBASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Gm22392-201ENSMUST00000177971 107 ntBASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Gm25936-201ENSMUST00000179952 114 ntBASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Mir7063-201ENSMUST00000184158 91 ntBASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Mir7047-201ENSMUST00000184595 64 ntBASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Gm37771-201ENSMUST00000193121 265 ntBASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Ighv12-1-201ENSMUST00000195542 329 ntBASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Gm43512-201ENSMUST00000198495 176 ntBASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Gm43955-201ENSMUST00000204332 142 ntBASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Gm2446-201ENSMUST00000220144 772 ntBASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Gm30738-201ENSMUST00000221346 502 ntBASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 Gm22443-201ENSMUST00000082890 107 ntBASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC0.83□□□□□ -2.28
Trav4-2A0A075B638 AC133934.2-201ENSMUST00000221729 4129 ntBASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Gm25495-201ENSMUST00000104431 131 ntBASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Mdga2-203ENSMUST00000113942 423 ntBASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Gm14657-201ENSMUST00000117461 302 ntBASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Gm14358-201ENSMUST00000118458 403 ntBASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Gm12550-201ENSMUST00000118478 329 ntBASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 n-R5s15-201ENSMUST00000122635 111 ntBASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Gm23670-201ENSMUST00000157469 119 ntBASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Gm24837-201ENSMUST00000158683 81 ntBASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Gm22663-201ENSMUST00000158721 102 ntBASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Snord87-201ENSMUST00000175437 87 ntBASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Gm26189-201ENSMUST00000179879 107 ntBASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Gm44391-201ENSMUST00000198490 93 ntBASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Gm44024-201ENSMUST00000203008 476 ntBASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Gm44825-201ENSMUST00000207557 150 ntBASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Gm44598-201ENSMUST00000207566 150 ntBASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Gm23452-201ENSMUST00000083327 107 ntBASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Snord7-201ENSMUST00000083781 97 ntBASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Gm26327-201ENSMUST00000093724 111 ntBASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
Trav4-2A0A075B638 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 Gm23950-201ENSMUST00000104026 129 ntBASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 Gm7974-201ENSMUST00000117154 408 ntBASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 Gm13903-201ENSMUST00000120945 193 ntBASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 Gm16359-201ENSMUST00000124511 289 ntBASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 Gm22537-201ENSMUST00000158172 199 ntBASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 Snord11-201ENSMUST00000158468 84 ntBASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 Gm24053-201ENSMUST00000158620 105 ntBASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 Gm23181-201ENSMUST00000158685 110 ntBASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 Mir7068-201ENSMUST00000183439 74 ntBASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 Mir6370-201ENSMUST00000183510 120 ntBASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 Gm8747-201ENSMUST00000195392 751 ntBASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 Gm43652-201ENSMUST00000196219 675 ntBASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 Gm43659-201ENSMUST00000200894 628 ntBASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 AC122225.1-201ENSMUST00000215641 369 ntBASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 AC173482.2-201ENSMUST00000224044 750 ntBASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 AC131068.1-201ENSMUST00000226891 482 ntBASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 Gm23246-201ENSMUST00000083371 67 ntBASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC0.81□□□□□ -2.28
Trav4-2A0A075B638 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 Gm11784-201ENSMUST00000118568 474 ntBASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 Gm22227-201ENSMUST00000157356 259 ntBASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 Gm25220-201ENSMUST00000157546 95 ntBASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 Gm24601-201ENSMUST00000157970 143 ntBASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 Gm24846-201ENSMUST00000158033 108 ntBASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 Gm22611-201ENSMUST00000158288 150 ntBASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 Gm17062-201ENSMUST00000166987 461 ntBASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 Gm24333-201ENSMUST00000175101 84 ntBASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 Gm25035-201ENSMUST00000175414 77 ntBASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 104 ms