Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm24787-201ENSMUST00000157380 123 ntBASIC2.51□□□□□ -2.01
H2afb1S4R1E0 Gm24959-201ENSMUST00000157924 146 ntBASIC2.51□□□□□ -2.01
H2afb1S4R1E0 Gm25434-201ENSMUST00000158278 167 ntBASIC2.51□□□□□ -2.01
H2afb1S4R1E0 Gm15914-201ENSMUST00000161922 309 ntBASIC2.51□□□□□ -2.01
H2afb1S4R1E0 Gm16289-201ENSMUST00000162079 183 ntBASIC2.51□□□□□ -2.01
H2afb1S4R1E0 Gm17186-201ENSMUST00000171742 456 ntBASIC2.51□□□□□ -2.01
H2afb1S4R1E0 Gm8114-201ENSMUST00000172225 484 ntBASIC2.51□□□□□ -2.01
H2afb1S4R1E0 Snord53-201ENSMUST00000175146 78 ntBASIC2.51□□□□□ -2.01
H2afb1S4R1E0 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
H2afb1S4R1E0 Gm28860-201ENSMUST00000188103 313 ntBASIC2.51□□□□□ -2.01
H2afb1S4R1E0 Gm29335-201ENSMUST00000188361 459 ntBASIC2.51□□□□□ -2.01
H2afb1S4R1E0 Gm28506-201ENSMUST00000189937 150 ntBASIC2.51□□□□□ -2.01
H2afb1S4R1E0 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
H2afb1S4R1E0 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.51□□□□□ -2.01
H2afb1S4R1E0 Gm44336-201ENSMUST00000203696 468 ntBASIC2.51□□□□□ -2.01
H2afb1S4R1E0 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC2.51□□□□□ -2.01
H2afb1S4R1E0 AC164567.2-201ENSMUST00000219363 445 ntBASIC2.51□□□□□ -2.01
H2afb1S4R1E0 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.51□□□□□ -2.01
H2afb1S4R1E0 AC158981.3-202ENSMUST00000228906 523 ntBASIC2.51□□□□□ -2.01
H2afb1S4R1E0 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
H2afb1S4R1E0 Gm6030-201ENSMUST00000078768 402 ntBASIC2.51□□□□□ -2.01
H2afb1S4R1E0 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
H2afb1S4R1E0 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
H2afb1S4R1E0 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Gm13504-201ENSMUST00000117490 316 ntBASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Gm12871-201ENSMUST00000118758 438 ntBASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Gm15223-201ENSMUST00000120989 826 ntBASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Gm24839-201ENSMUST00000122602 107 ntBASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Gm16533-201ENSMUST00000140035 228 ntBASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Gm23435-201ENSMUST00000157183 156 ntBASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Gm23956-201ENSMUST00000157211 119 ntBASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Gm23725-201ENSMUST00000177876 107 ntBASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Mir6975-201ENSMUST00000184879 61 ntBASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Gm43723-201ENSMUST00000196886 189 ntBASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Gm44903-201ENSMUST00000206840 130 ntBASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.5□□□□□ -2.01
H2afb1S4R1E0 AC140477.1-201ENSMUST00000222354 246 ntBASIC2.5□□□□□ -2.01
H2afb1S4R1E0 AC104832.1-201ENSMUST00000222938 550 ntBASIC2.5□□□□□ -2.01
H2afb1S4R1E0 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.5□□□□□ -2.01
H2afb1S4R1E0 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Gm22247-201ENSMUST00000082476 131 ntBASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
H2afb1S4R1E0 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Mir687-201ENSMUST00000102166 89 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Gm12255-201ENSMUST00000117184 284 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Gm14013-201ENSMUST00000119006 270 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Gm13541-201ENSMUST00000119519 283 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Gm13153-201ENSMUST00000120969 637 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Gm22038-201ENSMUST00000157277 242 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Gm25909-201ENSMUST00000157619 121 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Gm24192-201ENSMUST00000157978 145 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Gm23033-201ENSMUST00000157996 134 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Gm24853-201ENSMUST00000158026 121 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Gm17148-201ENSMUST00000164702 249 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Snord93-201ENSMUST00000175580 71 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Mir6408-201ENSMUST00000183643 91 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Gm34015-201ENSMUST00000194908 451 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.49□□□□□ -2.01
H2afb1S4R1E0 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
H2afb1S4R1E0 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Gm44870-201ENSMUST00000207291 357 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC2.49□□□□□ -2.01
H2afb1S4R1E0 AC124346.1-201ENSMUST00000218539 364 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 CT009718.4-201ENSMUST00000221881 109 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 AC124489.2-201ENSMUST00000223930 589 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
H2afb1S4R1E0 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Gm24043-201ENSMUST00000083108 116 ntBASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
H2afb1S4R1E0 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Gm25466-201ENSMUST00000103995 132 ntBASIC2.48□□□□□ -2.01
H2afb1S4R1E0 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Gm22032-201ENSMUST00000116946 116 ntBASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Gm13424-201ENSMUST00000122301 354 ntBASIC2.48□□□□□ -2.01
H2afb1S4R1E0 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms