Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm23098-201ENSMUST00000157552 299 ntBASIC4.39□□□□□ -1.71
Nubp1Q9R060 Snord50b-201ENSMUST00000178497 72 ntBASIC4.39□□□□□ -1.71
Nubp1Q9R060 Mir6960-201ENSMUST00000183449 61 ntBASIC4.39□□□□□ -1.71
Nubp1Q9R060 Mir3620-201ENSMUST00000184710 61 ntBASIC4.39□□□□□ -1.71
Nubp1Q9R060 Gm28118-201ENSMUST00000185957 294 ntBASIC4.39□□□□□ -1.71
Nubp1Q9R060 Gm2497-201ENSMUST00000189539 601 ntBASIC4.39□□□□□ -1.71
Nubp1Q9R060 Mir3068-202ENSMUST00000197755 79 ntBASIC4.39□□□□□ -1.71
Nubp1Q9R060 Gm4321-201ENSMUST00000200520 442 ntBASIC4.39□□□□□ -1.71
Nubp1Q9R060 Gm42739-201ENSMUST00000200687 226 ntBASIC4.39□□□□□ -1.71
Nubp1Q9R060 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Nubp1Q9R060 n-R5s88-201ENSMUST00000083173 118 ntBASIC4.39□□□□□ -1.71
Nubp1Q9R060 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Nubp1Q9R060 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Nubp1Q9R060 Gm42600-201ENSMUST00000202081 3588 ntBASIC4.39□□□□□ -1.71
Nubp1Q9R060 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Nubp1Q9R060 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.38□□□□□ -1.71
Nubp1Q9R060 Gm37738-201ENSMUST00000192396 4716 ntBASIC4.38□□□□□ -1.71
Nubp1Q9R060 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.38□□□□□ -1.71
Nubp1Q9R060 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Nubp1Q9R060 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Nubp1Q9R060 AC144772.1-201ENSMUST00000226372 2398 ntBASIC4.38□□□□□ -1.71
Nubp1Q9R060 Gm22003-201ENSMUST00000101885 107 ntBASIC4.38□□□□□ -1.71
Nubp1Q9R060 Snord14c-201ENSMUST00000101927 86 ntBASIC4.38□□□□□ -1.71
Nubp1Q9R060 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Nubp1Q9R060 Gm22395-201ENSMUST00000177427 96 ntBASIC4.38□□□□□ -1.71
Nubp1Q9R060 Gm22756-201ENSMUST00000180118 107 ntBASIC4.38□□□□□ -1.71
Nubp1Q9R060 Gm37545-201ENSMUST00000186512 148 ntBASIC4.38□□□□□ -1.71
Nubp1Q9R060 Gm37123-201ENSMUST00000192994 1171 ntBASIC4.38□□□□□ -1.71
Nubp1Q9R060 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Nubp1Q9R060 Gm45492-201ENSMUST00000211611 288 ntBASIC4.38□□□□□ -1.71
Nubp1Q9R060 Gm8508-201ENSMUST00000061226 363 ntBASIC4.38□□□□□ -1.71
Nubp1Q9R060 Gm26054-201ENSMUST00000083037 107 ntBASIC4.38□□□□□ -1.71
Nubp1Q9R060 Gm24492-201ENSMUST00000083798 107 ntBASIC4.38□□□□□ -1.71
Nubp1Q9R060 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Nubp1Q9R060 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.38□□□□□ -1.71
Nubp1Q9R060 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Nubp1Q9R060 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Nubp1Q9R060 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Nubp1Q9R060 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Nubp1Q9R060 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Nubp1Q9R060 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Nubp1Q9R060 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Nubp1Q9R060 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Nubp1Q9R060 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Nubp1Q9R060 Gm24234-201ENSMUST00000104316 107 ntBASIC4.37□□□□□ -1.71
Nubp1Q9R060 Gm6025-201ENSMUST00000121517 201 ntBASIC4.37□□□□□ -1.71
Nubp1Q9R060 Gm26049-201ENSMUST00000157313 108 ntBASIC4.37□□□□□ -1.71
Nubp1Q9R060 Gm22483-201ENSMUST00000157986 274 ntBASIC4.37□□□□□ -1.71
Nubp1Q9R060 Gm10087-201ENSMUST00000167650 330 ntBASIC4.37□□□□□ -1.71
Nubp1Q9R060 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC4.37□□□□□ -1.71
Nubp1Q9R060 Gm22177-201ENSMUST00000175002 158 ntBASIC4.37□□□□□ -1.71
Nubp1Q9R060 Gm27869-201ENSMUST00000184327 122 ntBASIC4.37□□□□□ -1.71
Nubp1Q9R060 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC4.37□□□□□ -1.71
Nubp1Q9R060 Gm43602-201ENSMUST00000196772 300 ntBASIC4.37□□□□□ -1.71
Nubp1Q9R060 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Nubp1Q9R060 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
Nubp1Q9R060 Gm24625-201ENSMUST00000082622 130 ntBASIC4.37□□□□□ -1.71
Nubp1Q9R060 Gm23875-201ENSMUST00000083711 318 ntBASIC4.37□□□□□ -1.71
Nubp1Q9R060 Gm22681-201ENSMUST00000083853 106 ntBASIC4.37□□□□□ -1.71
Nubp1Q9R060 Gm24449-201ENSMUST00000083985 106 ntBASIC4.37□□□□□ -1.71
Nubp1Q9R060 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.37□□□□□ -1.71
Nubp1Q9R060 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Nubp1Q9R060 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Nubp1Q9R060 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Nubp1Q9R060 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Nubp1Q9R060 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Nubp1Q9R060 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
Nubp1Q9R060 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Nubp1Q9R060 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Nubp1Q9R060 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Nubp1Q9R060 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
Nubp1Q9R060 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC4.36□□□□□ -1.71
Nubp1Q9R060 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Nubp1Q9R060 Gm37143-201ENSMUST00000195180 3259 ntBASIC4.36□□□□□ -1.71
Nubp1Q9R060 Snora64-201ENSMUST00000104521 134 ntBASIC4.36□□□□□ -1.71
Nubp1Q9R060 Gm26249-201ENSMUST00000116708 118 ntBASIC4.36□□□□□ -1.71
Nubp1Q9R060 Gm14916-201ENSMUST00000121904 204 ntBASIC4.36□□□□□ -1.71
Nubp1Q9R060 Gm7840-201ENSMUST00000122086 533 ntBASIC4.36□□□□□ -1.71
Nubp1Q9R060 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.36□□□□□ -1.71
Nubp1Q9R060 Gm25846-201ENSMUST00000158013 135 ntBASIC4.36□□□□□ -1.71
Nubp1Q9R060 Mir3058-201ENSMUST00000175126 91 ntBASIC4.36□□□□□ -1.71
Nubp1Q9R060 Gm22192-201ENSMUST00000175128 85 ntBASIC4.36□□□□□ -1.71
Nubp1Q9R060 Gm25253-201ENSMUST00000179958 107 ntBASIC4.36□□□□□ -1.71
Nubp1Q9R060 Gm27564-201ENSMUST00000185196 96 ntBASIC4.36□□□□□ -1.71
Nubp1Q9R060 Gm43993-201ENSMUST00000203972 247 ntBASIC4.36□□□□□ -1.71
Nubp1Q9R060 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC4.36□□□□□ -1.71
Nubp1Q9R060 AC160984.2-201ENSMUST00000224927 791 ntBASIC4.36□□□□□ -1.71
Nubp1Q9R060 AC155167.3-201ENSMUST00000226349 217 ntBASIC4.36□□□□□ -1.71
Nubp1Q9R060 Gm25632-201ENSMUST00000083112 85 ntBASIC4.36□□□□□ -1.71
Nubp1Q9R060 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.36□□□□□ -1.71
Nubp1Q9R060 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.36□□□□□ -1.71
Nubp1Q9R060 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
Nubp1Q9R060 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Nubp1Q9R060 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Nubp1Q9R060 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Nubp1Q9R060 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Nubp1Q9R060 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Nubp1Q9R060 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Nubp1Q9R060 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.35□□□□□ -1.71
Nubp1Q9R060 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms