Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm23352-201ENSMUST00000158428 64 ntBASIC2.13□□□□□ -2.07
Upk3aQ9JKX8 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Upk3aQ9JKX8 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.13□□□□□ -2.07
Upk3aQ9JKX8 Gm27399-201ENSMUST00000184250 78 ntBASIC2.13□□□□□ -2.07
Upk3aQ9JKX8 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
Upk3aQ9JKX8 Trbv7-201ENSMUST00000193339 402 ntBASIC2.13□□□□□ -2.07
Upk3aQ9JKX8 Gm38333-201ENSMUST00000193608 604 ntBASIC2.13□□□□□ -2.07
Upk3aQ9JKX8 Gm43587-201ENSMUST00000199590 204 ntBASIC2.13□□□□□ -2.07
Upk3aQ9JKX8 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.13□□□□□ -2.07
Upk3aQ9JKX8 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC2.13□□□□□ -2.07
Upk3aQ9JKX8 Gm44472-201ENSMUST00000204922 943 ntBASIC2.13□□□□□ -2.07
Upk3aQ9JKX8 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.13□□□□□ -2.07
Upk3aQ9JKX8 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.13□□□□□ -2.07
Upk3aQ9JKX8 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.13□□□□□ -2.07
Upk3aQ9JKX8 AC102291.2-201ENSMUST00000228083 367 ntBASIC2.13□□□□□ -2.07
Upk3aQ9JKX8 Gm22810-201ENSMUST00000082741 158 ntBASIC2.13□□□□□ -2.07
Upk3aQ9JKX8 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
Upk3aQ9JKX8 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm26154-201ENSMUST00000102339 96 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm22496-201ENSMUST00000104493 88 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm13341-201ENSMUST00000120780 672 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm14049-201ENSMUST00000121009 636 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm13913-201ENSMUST00000121126 260 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm23885-201ENSMUST00000122682 294 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm22083-201ENSMUST00000157586 102 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm24439-201ENSMUST00000157894 117 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Mir1927-201ENSMUST00000158579 109 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm22093-201ENSMUST00000158980 111 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm25642-201ENSMUST00000175137 66 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm25175-201ENSMUST00000178712 79 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm24464-201ENSMUST00000179697 107 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm24306-201ENSMUST00000180229 79 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm27028-201ENSMUST00000182303 399 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm27761-201ENSMUST00000184091 131 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm37000-201ENSMUST00000193058 428 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm29848-201ENSMUST00000203107 295 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm25257-201ENSMUST00000083907 110 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm22866-201ENSMUST00000083947 177 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.12□□□□□ -2.07
Upk3aQ9JKX8 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 Gm14793-201ENSMUST00000118739 311 ntBASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 Gm14629-201ENSMUST00000122428 144 ntBASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 Gm26256-201ENSMUST00000122499 186 ntBASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 Gm16510-201ENSMUST00000153501 249 ntBASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 Gm22483-201ENSMUST00000157986 274 ntBASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 Gm24900-201ENSMUST00000158128 134 ntBASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 Gm25707-201ENSMUST00000175120 96 ntBASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 Mir5101-201ENSMUST00000175181 83 ntBASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 Gm26622-201ENSMUST00000180520 298 ntBASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 Gm21673-201ENSMUST00000186640 436 ntBASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 Gm29429-201ENSMUST00000187071 121 ntBASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 Gm21135-201ENSMUST00000189023 436 ntBASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 AC158521.1-201ENSMUST00000225295 660 ntBASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
Upk3aQ9JKX8 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Gm26342-201ENSMUST00000104557 129 ntBASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Gm15175-201ENSMUST00000117629 132 ntBASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Gm12096-201ENSMUST00000121149 829 ntBASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Gm11849-201ENSMUST00000121293 261 ntBASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Gm24010-201ENSMUST00000157731 282 ntBASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Gm22554-201ENSMUST00000157798 147 ntBASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Mir3103-201ENSMUST00000175474 67 ntBASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Trbv24-201ENSMUST00000194614 347 ntBASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Gm44387-201ENSMUST00000196298 145 ntBASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Gm43286-201ENSMUST00000197420 424 ntBASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 AC173482.2-201ENSMUST00000224044 750 ntBASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Gm22247-201ENSMUST00000082476 131 ntBASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 n-R5s37-201ENSMUST00000082533 118 ntBASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Gm24044-201ENSMUST00000083107 156 ntBASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.1□□□□□ -2.07
Upk3aQ9JKX8 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 147 ms