Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.94□□□□□ -2.1
Trem1Q9JKE2 Gm22806-201ENSMUST00000082738 136 ntBASIC1.94□□□□□ -2.1
Trem1Q9JKE2 Gm24921-201ENSMUST00000083024 107 ntBASIC1.94□□□□□ -2.1
Trem1Q9JKE2 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Trem1Q9JKE2 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
Trem1Q9JKE2 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.93□□□□□ -2.1
Trem1Q9JKE2 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Gm24430-201ENSMUST00000104077 104 ntBASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Mdga2-203ENSMUST00000113942 423 ntBASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Gm26247-201ENSMUST00000116702 91 ntBASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Gm15120-201ENSMUST00000120602 301 ntBASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Gm13443-201ENSMUST00000120770 555 ntBASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Gm16129-201ENSMUST00000152628 486 ntBASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Gm27396-201ENSMUST00000157708 58 ntBASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Gm24053-201ENSMUST00000158620 105 ntBASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Ighv1-32-201ENSMUST00000195149 351 ntBASIC1.93□□□□□ -2.1
Trem1Q9JKE2 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Gm42925-201ENSMUST00000197359 285 ntBASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Gm42509-201ENSMUST00000197390 781 ntBASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Gm29809-201ENSMUST00000218423 493 ntBASIC1.93□□□□□ -2.1
Trem1Q9JKE2 AC101677.1-201ENSMUST00000218590 158 ntBASIC1.93□□□□□ -2.1
Trem1Q9JKE2 AC138667.2-201ENSMUST00000224880 598 ntBASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Gm25124-201ENSMUST00000083345 164 ntBASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Trem1Q9JKE2 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Gm22752-201ENSMUST00000102083 109 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Gm23202-201ENSMUST00000104376 129 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Gm25325-201ENSMUST00000122559 86 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Gm15692-201ENSMUST00000152173 352 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Gm24783-201ENSMUST00000157639 100 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Gm24771-201ENSMUST00000158508 137 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Gm7592-201ENSMUST00000160674 627 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Gm23568-201ENSMUST00000177960 92 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Gm24829-201ENSMUST00000179245 92 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Gm21638-201ENSMUST00000179473 836 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Gm21978-201ENSMUST00000179696 377 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Gm43930-201ENSMUST00000203868 845 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Gm44526-201ENSMUST00000204664 121 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 AC162931.1-201ENSMUST00000214184 267 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Gm18160-201ENSMUST00000214279 827 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 AC112274.2-201ENSMUST00000218436 170 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Trem1Q9JKE2 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Gm10025-201ENSMUST00000079568 372 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Gm26265-201ENSMUST00000083277 135 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Mir151-201ENSMUST00000083678 68 ntBASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Trem1Q9JKE2 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.91□□□□□ -2.1
Trem1Q9JKE2 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Trem1Q9JKE2 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
Trem1Q9JKE2 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC1.91□□□□□ -2.1
Trem1Q9JKE2 Gm6574-201ENSMUST00000120037 362 ntBASIC1.91□□□□□ -2.1
Trem1Q9JKE2 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC1.91□□□□□ -2.1
Trem1Q9JKE2 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC1.91□□□□□ -2.1
Trem1Q9JKE2 Gm27511-201ENSMUST00000183502 127 ntBASIC1.91□□□□□ -2.1
Trem1Q9JKE2 Gm28956-201ENSMUST00000189047 427 ntBASIC1.91□□□□□ -2.1
Trem1Q9JKE2 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.91□□□□□ -2.1
Trem1Q9JKE2 Gm42164-201ENSMUST00000198881 379 ntBASIC1.91□□□□□ -2.1
Trem1Q9JKE2 Gm42807-201ENSMUST00000200141 329 ntBASIC1.91□□□□□ -2.1
Trem1Q9JKE2 Gm45071-201ENSMUST00000205353 571 ntBASIC1.91□□□□□ -2.1
Trem1Q9JKE2 AC091260.1-201ENSMUST00000216112 229 ntBASIC1.91□□□□□ -2.1
Trem1Q9JKE2 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.91□□□□□ -2.1
Trem1Q9JKE2 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.91□□□□□ -2.1
Trem1Q9JKE2 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.91□□□□□ -2.1
Trem1Q9JKE2 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC1.91□□□□□ -2.1
Trem1Q9JKE2 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.91□□□□□ -2.1
Trem1Q9JKE2 AC129541.1-201ENSMUST00000226940 523 ntBASIC1.91□□□□□ -2.1
Trem1Q9JKE2 AC112935.1-201ENSMUST00000227603 250 ntBASIC1.91□□□□□ -2.1
Trem1Q9JKE2 Gm23454-201ENSMUST00000083332 133 ntBASIC1.91□□□□□ -2.1
Trem1Q9JKE2 Gm22578-201ENSMUST00000083730 107 ntBASIC1.91□□□□□ -2.1
Trem1Q9JKE2 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
Trem1Q9JKE2 Mir682-201ENSMUST00000102281 96 ntBASIC1.9□□□□□ -2.11
Trem1Q9JKE2 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Trem1Q9JKE2 Gm25784-201ENSMUST00000122524 81 ntBASIC1.9□□□□□ -2.11
Trem1Q9JKE2 U6.1-201ENSMUST00000157443 101 ntBASIC1.9□□□□□ -2.11
Trem1Q9JKE2 Gm23586-201ENSMUST00000157657 123 ntBASIC1.9□□□□□ -2.11
Trem1Q9JKE2 Gm23865-201ENSMUST00000157723 97 ntBASIC1.9□□□□□ -2.11
Trem1Q9JKE2 Gm25460-201ENSMUST00000157954 127 ntBASIC1.9□□□□□ -2.11
Trem1Q9JKE2 Gm26271-201ENSMUST00000158349 104 ntBASIC1.9□□□□□ -2.11
Trem1Q9JKE2 Gm16162-201ENSMUST00000162296 297 ntBASIC1.9□□□□□ -2.11
Trem1Q9JKE2 Gm20543-201ENSMUST00000174200 726 ntBASIC1.9□□□□□ -2.11
Trem1Q9JKE2 Gm29231-201ENSMUST00000179850 319 ntBASIC1.9□□□□□ -2.11
Trem1Q9JKE2 Gm37102-201ENSMUST00000195740 1105 ntBASIC1.9□□□□□ -2.11
Trem1Q9JKE2 Gm43217-201ENSMUST00000199513 367 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms