Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm24164-201ENSMUST00000093663 104 ntBASIC4.07□□□□□ -1.76
Trim39Q9ESN2 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Trim39Q9ESN2 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Trim39Q9ESN2 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Trim39Q9ESN2 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Trim39Q9ESN2 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trim39Q9ESN2 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.06□□□□□ -1.76
Trim39Q9ESN2 Gm4746-201ENSMUST00000120395 2406 ntBASIC4.06□□□□□ -1.76
Trim39Q9ESN2 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trim39Q9ESN2 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.06□□□□□ -1.76
Trim39Q9ESN2 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim39Q9ESN2 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim39Q9ESN2 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim39Q9ESN2 Gm13386-201ENSMUST00000117677 124 ntBASIC4.06□□□□□ -1.76
Trim39Q9ESN2 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.06□□□□□ -1.76
Trim39Q9ESN2 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.06□□□□□ -1.76
Trim39Q9ESN2 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.06□□□□□ -1.76
Trim39Q9ESN2 Gm23702-201ENSMUST00000158840 130 ntBASIC4.06□□□□□ -1.76
Trim39Q9ESN2 Gm24086-201ENSMUST00000175171 98 ntBASIC4.06□□□□□ -1.76
Trim39Q9ESN2 Gm21850-201ENSMUST00000179792 359 ntBASIC4.06□□□□□ -1.76
Trim39Q9ESN2 Gm42814-201ENSMUST00000199370 460 ntBASIC4.06□□□□□ -1.76
Trim39Q9ESN2 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim39Q9ESN2 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.06□□□□□ -1.76
Trim39Q9ESN2 Gm25204-201ENSMUST00000082843 106 ntBASIC4.06□□□□□ -1.76
Trim39Q9ESN2 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC4.06□□□□□ -1.76
Trim39Q9ESN2 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Trim39Q9ESN2 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trim39Q9ESN2 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trim39Q9ESN2 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.06□□□□□ -1.76
Trim39Q9ESN2 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim39Q9ESN2 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trim39Q9ESN2 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim39Q9ESN2 Gm23014-201ENSMUST00000104144 130 ntBASIC4.05□□□□□ -1.76
Trim39Q9ESN2 Gm13868-201ENSMUST00000122411 294 ntBASIC4.05□□□□□ -1.76
Trim39Q9ESN2 Gm22107-201ENSMUST00000122548 100 ntBASIC4.05□□□□□ -1.76
Trim39Q9ESN2 Gm25543-201ENSMUST00000122678 312 ntBASIC4.05□□□□□ -1.76
Trim39Q9ESN2 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.05□□□□□ -1.76
Trim39Q9ESN2 Gm28000-201ENSMUST00000184380 85 ntBASIC4.05□□□□□ -1.76
Trim39Q9ESN2 Gm27520-201ENSMUST00000184872 81 ntBASIC4.05□□□□□ -1.76
Trim39Q9ESN2 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.05□□□□□ -1.76
Trim39Q9ESN2 AC122242.1-201ENSMUST00000224650 304 ntBASIC4.05□□□□□ -1.76
Trim39Q9ESN2 Gm24762-201ENSMUST00000083689 104 ntBASIC4.05□□□□□ -1.76
Trim39Q9ESN2 Gm22826-201ENSMUST00000083774 165 ntBASIC4.05□□□□□ -1.76
Trim39Q9ESN2 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Trim39Q9ESN2 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC4.05□□□□□ -1.76
Trim39Q9ESN2 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trim39Q9ESN2 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.05□□□□□ -1.76
Trim39Q9ESN2 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim39Q9ESN2 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim39Q9ESN2 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.04□□□□□ -1.76
Trim39Q9ESN2 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim39Q9ESN2 Gm14593-201ENSMUST00000119948 294 ntBASIC4.04□□□□□ -1.76
Trim39Q9ESN2 Gm14303-201ENSMUST00000121320 171 ntBASIC4.04□□□□□ -1.76
Trim39Q9ESN2 Gm26027-201ENSMUST00000122725 268 ntBASIC4.04□□□□□ -1.76
Trim39Q9ESN2 Gm22883-201ENSMUST00000157376 106 ntBASIC4.04□□□□□ -1.76
Trim39Q9ESN2 Gm24113-201ENSMUST00000157477 276 ntBASIC4.04□□□□□ -1.76
Trim39Q9ESN2 Gm22177-201ENSMUST00000175002 158 ntBASIC4.04□□□□□ -1.76
Trim39Q9ESN2 Mir3090-201ENSMUST00000175597 87 ntBASIC4.04□□□□□ -1.76
Trim39Q9ESN2 Mir7056-201ENSMUST00000183776 59 ntBASIC4.04□□□□□ -1.76
Trim39Q9ESN2 Gm28830-201ENSMUST00000188192 213 ntBASIC4.04□□□□□ -1.76
Trim39Q9ESN2 Gm42774-201ENSMUST00000198854 283 ntBASIC4.04□□□□□ -1.76
Trim39Q9ESN2 Gm19908-201ENSMUST00000204684 391 ntBASIC4.04□□□□□ -1.76
Trim39Q9ESN2 Gm9377-201ENSMUST00000207227 623 ntBASIC4.04□□□□□ -1.76
Trim39Q9ESN2 Gm17779-201ENSMUST00000213395 394 ntBASIC4.04□□□□□ -1.76
Trim39Q9ESN2 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.04□□□□□ -1.76
Trim39Q9ESN2 AC168880.2-201ENSMUST00000224488 201 ntBASIC4.04□□□□□ -1.76
Trim39Q9ESN2 Gm25815-201ENSMUST00000082755 107 ntBASIC4.04□□□□□ -1.76
Trim39Q9ESN2 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim39Q9ESN2 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim39Q9ESN2 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trim39Q9ESN2 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.04□□□□□ -1.76
Trim39Q9ESN2 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.03□□□□□ -1.76
Trim39Q9ESN2 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trim39Q9ESN2 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trim39Q9ESN2 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.03□□□□□ -1.76
Trim39Q9ESN2 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.03□□□□□ -1.76
Trim39Q9ESN2 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trim39Q9ESN2 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trim39Q9ESN2 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trim39Q9ESN2 Gm23063-201ENSMUST00000102350 93 ntBASIC4.03□□□□□ -1.76
Trim39Q9ESN2 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trim39Q9ESN2 Gm9157-201ENSMUST00000117673 225 ntBASIC4.03□□□□□ -1.76
Trim39Q9ESN2 Gm12571-201ENSMUST00000118132 243 ntBASIC4.03□□□□□ -1.76
Trim39Q9ESN2 Gm26187-201ENSMUST00000157693 101 ntBASIC4.03□□□□□ -1.76
Trim39Q9ESN2 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC4.03□□□□□ -1.76
Trim39Q9ESN2 Gm27457-201ENSMUST00000184771 156 ntBASIC4.03□□□□□ -1.76
Trim39Q9ESN2 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.03□□□□□ -1.76
Trim39Q9ESN2 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.03□□□□□ -1.76
Trim39Q9ESN2 AC173345.2-201ENSMUST00000222795 153 ntBASIC4.03□□□□□ -1.76
Trim39Q9ESN2 AC183092.1-201ENSMUST00000224301 153 ntBASIC4.03□□□□□ -1.76
Trim39Q9ESN2 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim39Q9ESN2 AC117226.1-201ENSMUST00000221635 3737 ntBASIC4.03□□□□□ -1.76
Trim39Q9ESN2 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trim39Q9ESN2 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim39Q9ESN2 Gm10400-201ENSMUST00000203920 3835 ntBASIC4.03□□□□□ -1.76
Trim39Q9ESN2 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trim39Q9ESN2 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
Trim39Q9ESN2 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
Trim39Q9ESN2 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim39Q9ESN2 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 128.9 ms