Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm24061-201ENSMUST00000157489 120 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Gm22101-201ENSMUST00000157928 103 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Gm24191-201ENSMUST00000157977 122 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Gm22521-201ENSMUST00000158272 134 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Mir5118-201ENSMUST00000175551 67 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Gm26061-201ENSMUST00000175584 108 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Gm25198-201ENSMUST00000178574 110 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Mir6335-201ENSMUST00000184081 98 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Gm27520-201ENSMUST00000184872 81 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Gm37128-201ENSMUST00000192599 232 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Gm19252-201ENSMUST00000204705 305 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 AC130222.1-201ENSMUST00000221198 256 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 AC154521.1-201ENSMUST00000222635 330 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Gm24460-201ENSMUST00000082731 106 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Gm25475-201ENSMUST00000082825 180 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Gm22782-201ENSMUST00000104082 132 ntBASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Gm25485-201ENSMUST00000104120 132 ntBASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Snord98-201ENSMUST00000116819 65 ntBASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Gm11854-201ENSMUST00000117839 446 ntBASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Cox20-ps-201ENSMUST00000119872 353 ntBASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Gm14269-201ENSMUST00000120455 306 ntBASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Defa-ps13-201ENSMUST00000120695 204 ntBASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Gm25220-201ENSMUST00000157546 95 ntBASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Gm17186-201ENSMUST00000171742 456 ntBASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Gm23268-201ENSMUST00000175494 78 ntBASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Gm28008-201ENSMUST00000184021 186 ntBASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Gm27624-201ENSMUST00000185047 177 ntBASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Gm44526-201ENSMUST00000204664 121 ntBASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Gm6842-201ENSMUST00000211361 390 ntBASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 AC132437.1-201ENSMUST00000218308 320 ntBASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 AC117588.2-201ENSMUST00000228340 311 ntBASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Gm25207-201ENSMUST00000093745 107 ntBASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Nkx2-4Q9EQM3 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Mir687-201ENSMUST00000102166 89 ntBASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Gm7123-201ENSMUST00000117647 213 ntBASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Gm23234-201ENSMUST00000157304 134 ntBASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Gm17166-201ENSMUST00000172006 431 ntBASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Mir3076-201ENSMUST00000175415 60 ntBASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Gm25284-201ENSMUST00000180345 141 ntBASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Gm27580-201ENSMUST00000183666 149 ntBASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Gm28650-201ENSMUST00000188413 411 ntBASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Gm38019-201ENSMUST00000195133 380 ntBASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Gm9379-201ENSMUST00000196790 646 ntBASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Gm45704-201ENSMUST00000212582 403 ntBASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 AC125020.2-201ENSMUST00000218894 348 ntBASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 AC163357.1-201ENSMUST00000220847 233 ntBASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Snord68-201ENSMUST00000082516 86 ntBASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Gm23850-201ENSMUST00000083830 169 ntBASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Nkx2-4Q9EQM3 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.17□□□□□ -1.9
Nkx2-4Q9EQM3 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Nkx2-4Q9EQM3 Gm23256-201ENSMUST00000102235 110 ntBASIC3.17□□□□□ -1.9
Nkx2-4Q9EQM3 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.17□□□□□ -1.9
Nkx2-4Q9EQM3 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.17□□□□□ -1.9
Nkx2-4Q9EQM3 Gm7327-201ENSMUST00000120925 652 ntBASIC3.17□□□□□ -1.9
Nkx2-4Q9EQM3 Gm14761-201ENSMUST00000121363 262 ntBASIC3.17□□□□□ -1.9
Nkx2-4Q9EQM3 Gm13409-201ENSMUST00000122072 546 ntBASIC3.17□□□□□ -1.9
Nkx2-4Q9EQM3 Gm22945-201ENSMUST00000158557 157 ntBASIC3.17□□□□□ -1.9
Nkx2-4Q9EQM3 Gm22666-201ENSMUST00000158717 164 ntBASIC3.17□□□□□ -1.9
Nkx2-4Q9EQM3 Gm7953-201ENSMUST00000168278 469 ntBASIC3.17□□□□□ -1.9
Nkx2-4Q9EQM3 Gm23003-201ENSMUST00000179948 107 ntBASIC3.17□□□□□ -1.9
Nkx2-4Q9EQM3 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Nkx2-4Q9EQM3 Gm7329-201ENSMUST00000185915 210 ntBASIC3.17□□□□□ -1.9
Nkx2-4Q9EQM3 Gm42647-201ENSMUST00000195939 459 ntBASIC3.17□□□□□ -1.9
Nkx2-4Q9EQM3 Gm43115-201ENSMUST00000196244 160 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms