Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm24856-201ENSMUST00000082809 107 ntBASIC3.67□□□□□ -1.82
Ccdc9Q8VC31 Gm24316-201ENSMUST00000083041 107 ntBASIC3.67□□□□□ -1.82
Ccdc9Q8VC31 Gm25258-201ENSMUST00000083049 107 ntBASIC3.67□□□□□ -1.82
Ccdc9Q8VC31 Gm24535-201ENSMUST00000083140 107 ntBASIC3.67□□□□□ -1.82
Ccdc9Q8VC31 Gm22352-201ENSMUST00000083917 107 ntBASIC3.67□□□□□ -1.82
Ccdc9Q8VC31 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc9Q8VC31 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Ccdc9Q8VC31 Gm44679-201ENSMUST00000207202 2908 ntBASIC3.67□□□□□ -1.82
Ccdc9Q8VC31 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Mir208b-201ENSMUST00000104735 77 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Gm12722-201ENSMUST00000118507 493 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Gm14359-201ENSMUST00000118883 424 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Gm9043-201ENSMUST00000119677 314 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Gm12872-201ENSMUST00000121835 320 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Gm22320-201ENSMUST00000157149 312 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Gm23350-201ENSMUST00000158429 103 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Gm17186-201ENSMUST00000171742 456 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Gm26430-201ENSMUST00000178054 107 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Mir6385-201ENSMUST00000184295 105 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Gm29147-201ENSMUST00000186846 315 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Gm6060-201ENSMUST00000188671 251 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Gm28744-201ENSMUST00000189939 340 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Gm28160-201ENSMUST00000191229 315 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Gm37104-201ENSMUST00000193278 196 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Gm44355-201ENSMUST00000200417 104 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Gm45439-201ENSMUST00000211723 359 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Gm35262-201ENSMUST00000215133 267 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 AC163033.1-201ENSMUST00000218608 157 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 AC173482.4-201ENSMUST00000225096 348 ntBASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc9Q8VC31 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.65□□□□□ -1.82
Ccdc9Q8VC31 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.65□□□□□ -1.82
Ccdc9Q8VC31 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Ccdc9Q8VC31 Gm24127-201ENSMUST00000104110 130 ntBASIC3.65□□□□□ -1.83
Ccdc9Q8VC31 Gm25526-201ENSMUST00000104332 132 ntBASIC3.65□□□□□ -1.83
Ccdc9Q8VC31 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ccdc9Q8VC31 Gm14129-201ENSMUST00000122436 291 ntBASIC3.65□□□□□ -1.83
Ccdc9Q8VC31 Gm24818-201ENSMUST00000175093 161 ntBASIC3.65□□□□□ -1.83
Ccdc9Q8VC31 Gm28506-201ENSMUST00000189937 150 ntBASIC3.65□□□□□ -1.83
Ccdc9Q8VC31 Gm45365-201ENSMUST00000209489 256 ntBASIC3.65□□□□□ -1.83
Ccdc9Q8VC31 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Ccdc9Q8VC31 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.65□□□□□ -1.83
Ccdc9Q8VC31 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.65□□□□□ -1.83
Ccdc9Q8VC31 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.65□□□□□ -1.83
Ccdc9Q8VC31 Gm26447-201ENSMUST00000082448 129 ntBASIC3.65□□□□□ -1.83
Ccdc9Q8VC31 Gm23733-201ENSMUST00000083750 106 ntBASIC3.65□□□□□ -1.83
Ccdc9Q8VC31 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ccdc9Q8VC31 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Ccdc9Q8VC31 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Ccdc9Q8VC31 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Gm12806-201ENSMUST00000119384 268 ntBASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Gm14428-201ENSMUST00000120408 822 ntBASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Gm11829-201ENSMUST00000121003 282 ntBASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Gm7308-201ENSMUST00000121087 447 ntBASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 n-R5s87-201ENSMUST00000122752 116 ntBASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Gm23602-201ENSMUST00000157258 132 ntBASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Gm25454-201ENSMUST00000157947 315 ntBASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Gm25860-201ENSMUST00000158252 126 ntBASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Gm20415-201ENSMUST00000172877 423 ntBASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Gm25476-201ENSMUST00000175125 185 ntBASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Gm26180-201ENSMUST00000179942 107 ntBASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Gm28283-201ENSMUST00000185509 178 ntBASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Gm6801-201ENSMUST00000190697 339 ntBASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Gm43739-201ENSMUST00000198294 307 ntBASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Mir7227-201ENSMUST00000200408 59 ntBASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Gm44083-201ENSMUST00000203114 337 ntBASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Gm44063-201ENSMUST00000203307 376 ntBASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Gm45173-201ENSMUST00000206819 305 ntBASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 CT010455.1-201ENSMUST00000218579 413 ntBASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 AC122924.2-201ENSMUST00000220799 298 ntBASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 CT010454.1-201ENSMUST00000225975 265 ntBASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ccdc9Q8VC31 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Ccdc9Q8VC31 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.63□□□□□ -1.83
Ccdc9Q8VC31 Mir466h-201ENSMUST00000104748 81 ntBASIC3.63□□□□□ -1.83
Ccdc9Q8VC31 Gm13880-201ENSMUST00000118421 474 ntBASIC3.63□□□□□ -1.83
Ccdc9Q8VC31 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 138.3 ms