Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Gm8840-201ENSMUST00000122454 386 ntBASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Gm25325-201ENSMUST00000122559 86 ntBASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Gm7953-201ENSMUST00000168278 469 ntBASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Gm23415-201ENSMUST00000175519 83 ntBASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Gm4761-201ENSMUST00000178086 582 ntBASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Gm24019-201ENSMUST00000178620 107 ntBASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Gm26243-201ENSMUST00000179260 107 ntBASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Gm21088-201ENSMUST00000190875 316 ntBASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Gm29192-201ENSMUST00000190942 377 ntBASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Ighv2-8-201ENSMUST00000193935 262 ntBASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Gm43355-201ENSMUST00000196541 346 ntBASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Gm44083-201ENSMUST00000203114 337 ntBASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Gm44959-201ENSMUST00000209127 231 ntBASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.72□□□□□ -1.81
Vps53Q8CCB4 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.72□□□□□ -1.81
Vps53Q8CCB4 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.72□□□□□ -1.81
Vps53Q8CCB4 AC167140.1-201ENSMUST00000224710 403 ntBASIC3.72□□□□□ -1.81
Vps53Q8CCB4 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Gm23296-201ENSMUST00000082555 107 ntBASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Gm24859-201ENSMUST00000082729 107 ntBASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Gm23136-201ENSMUST00000083425 99 ntBASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Gm25937-201ENSMUST00000083912 107 ntBASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Vps53Q8CCB4 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Vps53Q8CCB4 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Vps53Q8CCB4 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.71□□□□□ -1.81
Vps53Q8CCB4 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Vps53Q8CCB4 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Vps53Q8CCB4 AC133079.1-201ENSMUST00000220943 1881 ntBASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Gm22496-201ENSMUST00000104493 88 ntBASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Mir743b-201ENSMUST00000104751 77 ntBASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Gm11253-201ENSMUST00000118486 201 ntBASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Gm12235-201ENSMUST00000118596 170 ntBASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Gm15760-201ENSMUST00000119553 283 ntBASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Gm15106-201ENSMUST00000119691 821 ntBASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Gm6265-201ENSMUST00000149263 231 ntBASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Gm25283-201ENSMUST00000157272 77 ntBASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Gm25341-201ENSMUST00000157461 268 ntBASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Gm23668-201ENSMUST00000157465 111 ntBASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Gm22257-201ENSMUST00000158687 301 ntBASIC3.71□□□□□ -1.82
Vps53Q8CCB4 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Gm25175-201ENSMUST00000178712 79 ntBASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Vps53Q8CCB4 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3.71□□□□□ -1.82
Vps53Q8CCB4 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.71□□□□□ -1.82
Vps53Q8CCB4 AC130222.1-201ENSMUST00000221198 256 ntBASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Gm33654-201ENSMUST00000221704 215 ntBASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Gm21937-201ENSMUST00000222825 218 ntBASIC3.71□□□□□ -1.82
Vps53Q8CCB4 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.71□□□□□ -1.82
Vps53Q8CCB4 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Vps53Q8CCB4 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Gm23412-201ENSMUST00000083017 107 ntBASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Vps53Q8CCB4 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Vps53Q8CCB4 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.7□□□□□ -1.82
Vps53Q8CCB4 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.7□□□□□ -1.82
Vps53Q8CCB4 Gm26423-201ENSMUST00000104277 128 ntBASIC3.7□□□□□ -1.82
Vps53Q8CCB4 Gm15167-201ENSMUST00000121997 187 ntBASIC3.7□□□□□ -1.82
Vps53Q8CCB4 Gm6956-201ENSMUST00000134724 546 ntBASIC3.7□□□□□ -1.82
Vps53Q8CCB4 Gm5958-201ENSMUST00000147698 297 ntBASIC3.7□□□□□ -1.82
Vps53Q8CCB4 Nron-204ENSMUST00000158971 370 ntBASIC3.7□□□□□ -1.82
Vps53Q8CCB4 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Vps53Q8CCB4 Gm8207-201ENSMUST00000171204 502 ntBASIC3.7□□□□□ -1.82
Vps53Q8CCB4 Gm25360-201ENSMUST00000178786 191 ntBASIC3.7□□□□□ -1.82
Vps53Q8CCB4 Gm22263-201ENSMUST00000180060 104 ntBASIC3.7□□□□□ -1.82
Vps53Q8CCB4 Gm28002-201ENSMUST00000184832 100 ntBASIC3.7□□□□□ -1.82
Vps53Q8CCB4 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.7□□□□□ -1.82
Vps53Q8CCB4 Gm9696-202ENSMUST00000191541 830 ntBASIC3.7□□□□□ -1.82
Vps53Q8CCB4 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.7□□□□□ -1.82
Vps53Q8CCB4 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.7□□□□□ -1.82
Vps53Q8CCB4 Gm23615-201ENSMUST00000082602 65 ntBASIC3.7□□□□□ -1.82
Vps53Q8CCB4 Gm25141-201ENSMUST00000083177 107 ntBASIC3.7□□□□□ -1.82
Vps53Q8CCB4 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Vps53Q8CCB4 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.69□□□□□ -1.82
Vps53Q8CCB4 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Gm14013-201ENSMUST00000119006 270 ntBASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Gm7327-201ENSMUST00000120925 652 ntBASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Gm23000-201ENSMUST00000157083 139 ntBASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Gm22037-201ENSMUST00000157280 296 ntBASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Gm23779-201ENSMUST00000157938 64 ntBASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Gm20534-201ENSMUST00000172957 172 ntBASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Gm27245-201ENSMUST00000184385 376 ntBASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Mir8106-201ENSMUST00000184520 139 ntBASIC3.69□□□□□ -1.82
Vps53Q8CCB4 Gm28282-201ENSMUST00000186072 186 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 665.8 ms