Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm23320-201ENSMUST00000104462 127 ntBASIC4.74□□□□□ -1.65
Trim47Q8C0E3 Gm12427-201ENSMUST00000117719 302 ntBASIC4.74□□□□□ -1.65
Trim47Q8C0E3 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.74□□□□□ -1.65
Trim47Q8C0E3 Gm24141-201ENSMUST00000122776 115 ntBASIC4.74□□□□□ -1.65
Trim47Q8C0E3 Gm25424-201ENSMUST00000157612 58 ntBASIC4.74□□□□□ -1.65
Trim47Q8C0E3 Gm44338-201ENSMUST00000198614 110 ntBASIC4.74□□□□□ -1.65
Trim47Q8C0E3 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.74□□□□□ -1.65
Trim47Q8C0E3 Gm45445-201ENSMUST00000209586 232 ntBASIC4.74□□□□□ -1.65
Trim47Q8C0E3 AC101945.3-201ENSMUST00000226568 153 ntBASIC4.74□□□□□ -1.65
Trim47Q8C0E3 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim47Q8C0E3 Gm22509-201ENSMUST00000082775 107 ntBASIC4.74□□□□□ -1.65
Trim47Q8C0E3 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim47Q8C0E3 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.74□□□□□ -1.65
Trim47Q8C0E3 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Trim47Q8C0E3 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim47Q8C0E3 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.74□□□□□ -1.65
Trim47Q8C0E3 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trim47Q8C0E3 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.73□□□□□ -1.65
Trim47Q8C0E3 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trim47Q8C0E3 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trim47Q8C0E3 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Trim47Q8C0E3 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Trim47Q8C0E3 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.73□□□□□ -1.65
Trim47Q8C0E3 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Trim47Q8C0E3 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.73□□□□□ -1.65
Trim47Q8C0E3 Gm11432-201ENSMUST00000117334 231 ntBASIC4.73□□□□□ -1.65
Trim47Q8C0E3 Gm25908-201ENSMUST00000157624 98 ntBASIC4.73□□□□□ -1.65
Trim47Q8C0E3 Gm24010-201ENSMUST00000157731 282 ntBASIC4.73□□□□□ -1.65
Trim47Q8C0E3 Gm24961-201ENSMUST00000157918 184 ntBASIC4.73□□□□□ -1.65
Trim47Q8C0E3 AC132615.1-201ENSMUST00000213873 255 ntBASIC4.73□□□□□ -1.65
Trim47Q8C0E3 AC100209.2-201ENSMUST00000224461 451 ntBASIC4.73□□□□□ -1.65
Trim47Q8C0E3 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.73□□□□□ -1.65
Trim47Q8C0E3 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.73□□□□□ -1.65
Trim47Q8C0E3 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.73□□□□□ -1.65
Trim47Q8C0E3 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trim47Q8C0E3 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Trim47Q8C0E3 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim47Q8C0E3 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.72□□□□□ -1.65
Trim47Q8C0E3 Gm23481-201ENSMUST00000104173 131 ntBASIC4.72□□□□□ -1.65
Trim47Q8C0E3 Gm24788-201ENSMUST00000104283 156 ntBASIC4.72□□□□□ -1.65
Trim47Q8C0E3 Snora64-201ENSMUST00000104521 134 ntBASIC4.72□□□□□ -1.65
Trim47Q8C0E3 Mir1298-201ENSMUST00000116681 98 ntBASIC4.72□□□□□ -1.65
Trim47Q8C0E3 Gm13756-201ENSMUST00000117618 222 ntBASIC4.72□□□□□ -1.65
Trim47Q8C0E3 Gm22225-201ENSMUST00000157358 278 ntBASIC4.72□□□□□ -1.65
Trim47Q8C0E3 Gm25220-201ENSMUST00000157546 95 ntBASIC4.72□□□□□ -1.65
Trim47Q8C0E3 Mir5098-201ENSMUST00000175320 82 ntBASIC4.72□□□□□ -1.65
Trim47Q8C0E3 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.72□□□□□ -1.65
Trim47Q8C0E3 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.72□□□□□ -1.65
Trim47Q8C0E3 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC4.72□□□□□ -1.65
Trim47Q8C0E3 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC4.72□□□□□ -1.65
Trim47Q8C0E3 Gm23042-201ENSMUST00000083866 101 ntBASIC4.72□□□□□ -1.65
Trim47Q8C0E3 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Trim47Q8C0E3 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim47Q8C0E3 Gm45662-201ENSMUST00000210054 2098 ntBASIC4.72□□□□□ -1.65
Trim47Q8C0E3 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.72□□□□□ -1.65
Trim47Q8C0E3 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim47Q8C0E3 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim47Q8C0E3 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.65
Trim47Q8C0E3 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Trim47Q8C0E3 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.71□□□□□ -1.65
Trim47Q8C0E3 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Trim47Q8C0E3 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
Trim47Q8C0E3 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Trim47Q8C0E3 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Trim47Q8C0E3 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trim47Q8C0E3 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Trim47Q8C0E3 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.71□□□□□ -1.66
Trim47Q8C0E3 Gm2182-201ENSMUST00000145243 663 ntBASIC4.71□□□□□ -1.66
Trim47Q8C0E3 Gm23817-201ENSMUST00000158449 104 ntBASIC4.71□□□□□ -1.66
Trim47Q8C0E3 Mir669j-201ENSMUST00000179023 121 ntBASIC4.71□□□□□ -1.66
Trim47Q8C0E3 Gm43586-201ENSMUST00000195948 310 ntBASIC4.71□□□□□ -1.66
Trim47Q8C0E3 Gm29704-201ENSMUST00000196011 253 ntBASIC4.71□□□□□ -1.66
Trim47Q8C0E3 Gm45492-201ENSMUST00000211611 288 ntBASIC4.71□□□□□ -1.66
Trim47Q8C0E3 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.71□□□□□ -1.66
Trim47Q8C0E3 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Trim47Q8C0E3 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Trim47Q8C0E3 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trim47Q8C0E3 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.71□□□□□ -1.66
Trim47Q8C0E3 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Trim47Q8C0E3 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Trim47Q8C0E3 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Trim47Q8C0E3 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Trim47Q8C0E3 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Trim47Q8C0E3 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Trim47Q8C0E3 Gm8666-201ENSMUST00000117517 292 ntBASIC4.7□□□□□ -1.66
Trim47Q8C0E3 Gm6762-201ENSMUST00000121769 289 ntBASIC4.7□□□□□ -1.66
Trim47Q8C0E3 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Trim47Q8C0E3 Gm22429-201ENSMUST00000158553 130 ntBASIC4.7□□□□□ -1.66
Trim47Q8C0E3 Mir5134-201ENSMUST00000175529 78 ntBASIC4.7□□□□□ -1.66
Trim47Q8C0E3 Gm27899-201ENSMUST00000184715 64 ntBASIC4.7□□□□□ -1.66
Trim47Q8C0E3 Gm42774-201ENSMUST00000198854 283 ntBASIC4.7□□□□□ -1.66
Trim47Q8C0E3 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Trim47Q8C0E3 Gm18441-201ENSMUST00000223539 617 ntBASIC4.7□□□□□ -1.66
Trim47Q8C0E3 Gm25895-201ENSMUST00000083714 100 ntBASIC4.7□□□□□ -1.66
Trim47Q8C0E3 Gm10172-201ENSMUST00000085929 558 ntBASIC4.7□□□□□ -1.66
Trim47Q8C0E3 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
Trim47Q8C0E3 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Trim47Q8C0E3 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.7□□□□□ -1.66
Trim47Q8C0E3 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Trim47Q8C0E3 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms