Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.52□□□□□ -1.69
Usp40Q8BWR4 AC153526.2-201ENSMUST00000218206 2031 ntBASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Mir541-201ENSMUST00000102097 90 ntBASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
Usp40Q8BWR4 n-R5s202-201ENSMUST00000104517 114 ntBASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Gm14649-201ENSMUST00000121814 324 ntBASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Gm6969-201ENSMUST00000140065 342 ntBASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Gm23759-201ENSMUST00000158351 268 ntBASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Gm25051-201ENSMUST00000158602 249 ntBASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Gm22532-201ENSMUST00000158822 140 ntBASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Gm17183-201ENSMUST00000171170 493 ntBASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Gm23151-201ENSMUST00000178061 107 ntBASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Gm25473-201ENSMUST00000180191 107 ntBASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Gm27893-201ENSMUST00000184408 194 ntBASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Gm20144-201ENSMUST00000203031 165 ntBASIC4.51□□□□□ -1.69
Usp40Q8BWR4 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Gm22979-201ENSMUST00000082609 159 ntBASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Usp40Q8BWR4 AC137842.3-201ENSMUST00000228855 2397 ntBASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Usp40Q8BWR4 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.51□□□□□ -1.69
Usp40Q8BWR4 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.5□□□□□ -1.69
Usp40Q8BWR4 Gm14429-201ENSMUST00000121881 2024 ntBASIC4.5□□□□□ -1.69
Usp40Q8BWR4 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC4.5□□□□□ -1.69
Usp40Q8BWR4 Gm2962-201ENSMUST00000159266 336 ntBASIC4.5□□□□□ -1.69
Usp40Q8BWR4 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC4.5□□□□□ -1.69
Usp40Q8BWR4 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC4.5□□□□□ -1.69
Usp40Q8BWR4 Gm9379-201ENSMUST00000196790 646 ntBASIC4.5□□□□□ -1.69
Usp40Q8BWR4 Gm44977-201ENSMUST00000205283 420 ntBASIC4.5□□□□□ -1.69
Usp40Q8BWR4 Gm44964-201ENSMUST00000207011 273 ntBASIC4.5□□□□□ -1.69
Usp40Q8BWR4 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC4.5□□□□□ -1.69
Usp40Q8BWR4 AC152979.1-201ENSMUST00000218214 289 ntBASIC4.5□□□□□ -1.69
Usp40Q8BWR4 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.5□□□□□ -1.69
Usp40Q8BWR4 Gm10033-201ENSMUST00000072427 1813 ntBASIC4.5□□□□□ -1.69
Usp40Q8BWR4 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Usp40Q8BWR4 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.5□□□□□ -1.69
Usp40Q8BWR4 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Usp40Q8BWR4 Gm43300-201ENSMUST00000198540 2043 ntBASIC4.5□□□□□ -1.69
Usp40Q8BWR4 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Usp40Q8BWR4 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Usp40Q8BWR4 Gm25539-201ENSMUST00000116886 122 ntBASIC4.49□□□□□ -1.69
Usp40Q8BWR4 Gm14803-201ENSMUST00000117163 361 ntBASIC4.49□□□□□ -1.69
Usp40Q8BWR4 Gm12568-201ENSMUST00000117362 624 ntBASIC4.49□□□□□ -1.69
Usp40Q8BWR4 Gm13901-201ENSMUST00000137252 468 ntBASIC4.49□□□□□ -1.69
Usp40Q8BWR4 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Usp40Q8BWR4 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Usp40Q8BWR4 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Usp40Q8BWR4 Gm17522-201ENSMUST00000178144 498 ntBASIC4.49□□□□□ -1.69
Usp40Q8BWR4 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Usp40Q8BWR4 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Usp40Q8BWR4 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Usp40Q8BWR4 Gm21893-201ENSMUST00000179119 397 ntBASIC4.49□□□□□ -1.69
Usp40Q8BWR4 Gm28358-202ENSMUST00000189292 223 ntBASIC4.49□□□□□ -1.69
Usp40Q8BWR4 Gm7837-201ENSMUST00000190873 412 ntBASIC4.49□□□□□ -1.69
Usp40Q8BWR4 AC188459.1-201ENSMUST00000216651 300 ntBASIC4.49□□□□□ -1.69
Usp40Q8BWR4 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.49□□□□□ -1.69
Usp40Q8BWR4 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Usp40Q8BWR4 Gm42585-201ENSMUST00000198731 4020 ntBASIC4.49□□□□□ -1.69
Usp40Q8BWR4 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Usp40Q8BWR4 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Gm26423-201ENSMUST00000104277 128 ntBASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Mir1198-201ENSMUST00000116995 121 ntBASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Gm11673-201ENSMUST00000117846 331 ntBASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Gm12417-201ENSMUST00000119153 403 ntBASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Gm26027-201ENSMUST00000122725 268 ntBASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Gm24060-201ENSMUST00000157494 95 ntBASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Gm16318-201ENSMUST00000162402 601 ntBASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Mir5127-201ENSMUST00000175295 71 ntBASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Gm24862-201ENSMUST00000179103 79 ntBASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Gm23310-201ENSMUST00000179105 79 ntBASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Gm25461-201ENSMUST00000179293 79 ntBASIC4.48□□□□□ -1.69
Usp40Q8BWR4 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Gm38080-201ENSMUST00000194035 268 ntBASIC4.48□□□□□ -1.69
Usp40Q8BWR4 AC126267.1-201ENSMUST00000214282 284 ntBASIC4.48□□□□□ -1.69
Usp40Q8BWR4 AC154994.1-201ENSMUST00000217395 302 ntBASIC4.48□□□□□ -1.69
Usp40Q8BWR4 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Gm26204-201ENSMUST00000082906 107 ntBASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Gm10242-201ENSMUST00000090064 330 ntBASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC4.48□□□□□ -1.69
Usp40Q8BWR4 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 116.8 ms