Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm7346-201ENSMUST00000169661 476 ntBASIC1.33□□□□□ -2.2
Col16a1Q8BLX7 Gm21064-202ENSMUST00000190583 278 ntBASIC1.33□□□□□ -2.2
Col16a1Q8BLX7 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Col16a1Q8BLX7 AC154296.1-201ENSMUST00000198150 67 ntBASIC1.33□□□□□ -2.2
Col16a1Q8BLX7 Gm44446-201ENSMUST00000204864 255 ntBASIC1.33□□□□□ -2.2
Col16a1Q8BLX7 Mir300-201ENSMUST00000083485 79 ntBASIC1.33□□□□□ -2.2
Col16a1Q8BLX7 Gm44679-201ENSMUST00000207202 2908 ntBASIC1.32□□□□□ -2.2
Col16a1Q8BLX7 Gm13131-201ENSMUST00000122228 321 ntBASIC1.32□□□□□ -2.2
Col16a1Q8BLX7 Gm22485-201ENSMUST00000157990 109 ntBASIC1.32□□□□□ -2.2
Col16a1Q8BLX7 Gm8161-201ENSMUST00000168739 481 ntBASIC1.32□□□□□ -2.2
Col16a1Q8BLX7 Gm24086-201ENSMUST00000175171 98 ntBASIC1.32□□□□□ -2.2
Col16a1Q8BLX7 Gm7329-201ENSMUST00000185915 210 ntBASIC1.32□□□□□ -2.2
Col16a1Q8BLX7 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC1.32□□□□□ -2.2
Col16a1Q8BLX7 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Col16a1Q8BLX7 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Col16a1Q8BLX7 Gm18546-201ENSMUST00000197245 676 ntBASIC1.32□□□□□ -2.2
Col16a1Q8BLX7 Gm43284-201ENSMUST00000200103 253 ntBASIC1.32□□□□□ -2.2
Col16a1Q8BLX7 Gm44794-201ENSMUST00000206550 411 ntBASIC1.32□□□□□ -2.2
Col16a1Q8BLX7 Gm19233-201ENSMUST00000219772 936 ntBASIC1.32□□□□□ -2.2
Col16a1Q8BLX7 Gm9318-201ENSMUST00000222444 438 ntBASIC1.32□□□□□ -2.2
Col16a1Q8BLX7 Gm26421-201ENSMUST00000104279 132 ntBASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm13577-201ENSMUST00000121365 205 ntBASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Mir5129-201ENSMUST00000174938 78 ntBASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm20698-201ENSMUST00000175657 233 ntBASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm20794-201ENSMUST00000177626 628 ntBASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm28356-202ENSMUST00000187566 858 ntBASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm20885-201ENSMUST00000190192 654 ntBASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm33571-201ENSMUST00000193271 657 ntBASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm36866-201ENSMUST00000193343 657 ntBASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm36047-201ENSMUST00000193659 657 ntBASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm20857-201ENSMUST00000194766 657 ntBASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm20858-201ENSMUST00000195459 657 ntBASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm30638-201ENSMUST00000195570 656 ntBASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm43708-201ENSMUST00000198857 961 ntBASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 AC161758.1-201ENSMUST00000226123 310 ntBASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm22293-201ENSMUST00000083314 109 ntBASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.31□□□□□ -2.2
Col16a1Q8BLX7 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Gm14868-201ENSMUST00000117840 216 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Gm23792-201ENSMUST00000122557 93 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Gm25247-201ENSMUST00000175475 90 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Gm27599-201ENSMUST00000183758 174 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Mir6380-201ENSMUST00000184334 81 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Gm8502-201ENSMUST00000185708 901 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Gm18775-201ENSMUST00000190763 586 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Gm43286-201ENSMUST00000197420 424 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Gm14879-201ENSMUST00000117308 507 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Gm14898-201ENSMUST00000120202 645 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Mup-ps1-201ENSMUST00000120720 544 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Gm13903-201ENSMUST00000120945 193 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Gm12327-201ENSMUST00000121729 1168 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Gm13602-201ENSMUST00000122405 493 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Gm26278-201ENSMUST00000157098 132 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Gm24552-201ENSMUST00000158646 103 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Mup-ps8-201ENSMUST00000178663 545 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Mup-ps6-201ENSMUST00000179564 545 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 AC154262.1-201ENSMUST00000225976 286 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Olfr1160-201ENSMUST00000099839 960 ntBASIC1.3□□□□□ -2.2
Col16a1Q8BLX7 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Col16a1Q8BLX7 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
Col16a1Q8BLX7 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.29□□□□□ -2.2
Col16a1Q8BLX7 Gm33866-201ENSMUST00000196911 289 ntBASIC1.29□□□□□ -2.2
Col16a1Q8BLX7 Gm43680-201ENSMUST00000199466 340 ntBASIC1.29□□□□□ -2.2
Col16a1Q8BLX7 Mir7215-201ENSMUST00000200383 51 ntBASIC1.29□□□□□ -2.2
Col16a1Q8BLX7 Gm29815-201ENSMUST00000202418 178 ntBASIC1.29□□□□□ -2.2
Col16a1Q8BLX7 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.29□□□□□ -2.2
Col16a1Q8BLX7 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Col16a1Q8BLX7 Gm25788-201ENSMUST00000082721 131 ntBASIC1.29□□□□□ -2.2
Col16a1Q8BLX7 Gm5583-201ENSMUST00000174328 1519 ntBASIC1.29□□□□□ -2.2
Col16a1Q8BLX7 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
Col16a1Q8BLX7 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
Col16a1Q8BLX7 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Col16a1Q8BLX7 Gm22019-201ENSMUST00000104359 96 ntBASIC1.28□□□□□ -2.2
Col16a1Q8BLX7 Gm14918-201ENSMUST00000118153 268 ntBASIC1.28□□□□□ -2.2
Col16a1Q8BLX7 Gm15659-201ENSMUST00000118881 341 ntBASIC1.28□□□□□ -2.2
Col16a1Q8BLX7 Gm14363-201ENSMUST00000122304 409 ntBASIC1.28□□□□□ -2.2
Col16a1Q8BLX7 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Col16a1Q8BLX7 Gm25898-201ENSMUST00000158303 106 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms