Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm23446-201ENSMUST00000177977 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Snord116l4-201ENSMUST00000177982 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm26201-201ENSMUST00000178047 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm24711-201ENSMUST00000178062 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm24609-201ENSMUST00000178166 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm23265-201ENSMUST00000178321 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm22812-201ENSMUST00000178329 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Snord116l3-201ENSMUST00000178370 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm26246-201ENSMUST00000178388 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm22131-201ENSMUST00000178415 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm25155-201ENSMUST00000178450 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm24760-201ENSMUST00000178530 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm26032-201ENSMUST00000178535 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm22285-201ENSMUST00000178576 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm22417-201ENSMUST00000178656 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Snord116l2-201ENSMUST00000178675 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm26270-201ENSMUST00000178690 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Snord116l16-201ENSMUST00000178777 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm25210-201ENSMUST00000178813 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm25157-201ENSMUST00000178914 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm23313-201ENSMUST00000178931 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Snord116l17-201ENSMUST00000178936 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm23089-201ENSMUST00000178947 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm22046-201ENSMUST00000179027 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Snord116l10-201ENSMUST00000179053 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm24153-201ENSMUST00000179280 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm25597-201ENSMUST00000179388 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Snord116l1-201ENSMUST00000179518 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm22941-201ENSMUST00000179630 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm25816-201ENSMUST00000179764 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Snord116l8-201ENSMUST00000179889 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Snord116l7-201ENSMUST00000179895 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Snord116l5-201ENSMUST00000179927 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Snord116l6-201ENSMUST00000179955 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm26188-201ENSMUST00000179963 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm25471-201ENSMUST00000180126 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm26433-201ENSMUST00000180227 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Snord116l11-201ENSMUST00000180312 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm22128-201ENSMUST00000180346 94 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm28755-201ENSMUST00000185773 199 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm28995-201ENSMUST00000186625 261 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm32033-201ENSMUST00000193483 339 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm38332-201ENSMUST00000194189 147 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm44223-201ENSMUST00000204854 114 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm44030-201ENSMUST00000204865 432 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm18453-201ENSMUST00000208000 626 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm44887-201ENSMUST00000208980 178 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm44959-201ENSMUST00000209127 231 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm26107-201ENSMUST00000083972 107 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Ddx55Q6ZPL9 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Gm26156-201ENSMUST00000116999 123 ntBASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Gm15844-201ENSMUST00000118016 576 ntBASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Gm14940-201ENSMUST00000119309 495 ntBASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Gm15223-201ENSMUST00000120989 826 ntBASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Gm12071-201ENSMUST00000121968 469 ntBASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Gm25391-201ENSMUST00000157342 134 ntBASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Gm24787-201ENSMUST00000157380 123 ntBASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Gm22843-201ENSMUST00000157710 134 ntBASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Gm17062-201ENSMUST00000166987 461 ntBASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Gm44409-201ENSMUST00000198810 166 ntBASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Gm43284-201ENSMUST00000200103 253 ntBASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Gm44657-201ENSMUST00000208568 450 ntBASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 AC130821.1-201ENSMUST00000221997 293 ntBASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.75□□□□□ -1.81
Ddx55Q6ZPL9 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 AC122887.2-201ENSMUST00000219465 1603 ntBASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Gm13314-201ENSMUST00000118742 335 ntBASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Gm13155-201ENSMUST00000119277 646 ntBASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Gm13518-201ENSMUST00000120018 233 ntBASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Gm8178-201ENSMUST00000121570 646 ntBASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Gm13868-201ENSMUST00000122411 294 ntBASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Gm24720-201ENSMUST00000157518 166 ntBASIC3.74□□□□□ -1.81
Ddx55Q6ZPL9 Gm23779-201ENSMUST00000157938 64 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms