Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Gm14073-201ENSMUST00000117344 381 ntBASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 Gm25805-201ENSMUST00000122788 108 ntBASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 Gm25965-201ENSMUST00000157170 93 ntBASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 Gm23960-201ENSMUST00000157206 131 ntBASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 Gm22349-201ENSMUST00000157864 107 ntBASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 Mir1947-201ENSMUST00000158235 85 ntBASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 Gm25162-201ENSMUST00000158906 159 ntBASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 Gm27875-201ENSMUST00000184425 123 ntBASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 Gm28685-201ENSMUST00000187545 1101 ntBASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 Gm45013-201ENSMUST00000206883 178 ntBASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 AC126253.2-201ENSMUST00000226518 205 ntBASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 Gm23722-201ENSMUST00000083002 130 ntBASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 Svet1-201ENSMUST00000209370 3940 ntBASIC3.87□□□□□ -1.79
Cpsf6Q6NVF9 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 AC135119.1-201ENSMUST00000227935 3717 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Mir761-201ENSMUST00000103245 76 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Mdga2-203ENSMUST00000113942 423 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Gm15497-201ENSMUST00000119137 551 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Gm11645-201ENSMUST00000121589 649 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Gm22213-201ENSMUST00000157564 119 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Gm23641-201ENSMUST00000157857 101 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Gm23782-201ENSMUST00000157939 120 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Gm22637-201ENSMUST00000158144 283 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Gm17186-201ENSMUST00000171742 456 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Mir21b-201ENSMUST00000184317 108 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Gm29603-201ENSMUST00000186792 334 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Gm7182-201ENSMUST00000193351 732 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Gm44337-201ENSMUST00000196553 114 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Gm4644-201ENSMUST00000197587 400 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Gm45006-201ENSMUST00000206078 690 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Gm8274-201ENSMUST00000219820 463 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Gm23875-201ENSMUST00000083711 318 ntBASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Cpsf6Q6NVF9 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Gm42927-201ENSMUST00000200624 3841 ntBASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Mir1b-201ENSMUST00000117012 122 ntBASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Gm12304-201ENSMUST00000120312 385 ntBASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Gm25913-201ENSMUST00000157617 135 ntBASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Gm22398-201ENSMUST00000174941 125 ntBASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Gm25731-201ENSMUST00000175167 125 ntBASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Gm27286-201ENSMUST00000184934 179 ntBASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Gm37796-201ENSMUST00000195327 134 ntBASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Gm42451-201ENSMUST00000197410 244 ntBASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Gm45445-201ENSMUST00000209586 232 ntBASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Gm24152-201ENSMUST00000082764 163 ntBASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Snord22-201ENSMUST00000083153 126 ntBASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Gm10351-201ENSMUST00000087694 125 ntBASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.85□□□□□ -1.79
Cpsf6Q6NVF9 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 143.8 ms