Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm27535-201ENSMUST00000183814 157 ntBASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Gm28339-201ENSMUST00000185845 696 ntBASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Gm28057-201ENSMUST00000186603 615 ntBASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Gm28148-201ENSMUST00000186924 697 ntBASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Gm28896-201ENSMUST00000188609 696 ntBASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Gm38107-201ENSMUST00000194873 696 ntBASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Gm43704-201ENSMUST00000196164 496 ntBASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 AC154276.2-201ENSMUST00000227707 309 ntBASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Gm5548-201ENSMUST00000055878 397 ntBASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Sh3rf1Q69ZI1 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Sh3rf1Q69ZI1 Gm14916-201ENSMUST00000121904 204 ntBASIC4.11□□□□□ -1.75
Sh3rf1Q69ZI1 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC4.11□□□□□ -1.75
Sh3rf1Q69ZI1 Gm25115-201ENSMUST00000157187 140 ntBASIC4.11□□□□□ -1.75
Sh3rf1Q69ZI1 Gm23957-201ENSMUST00000157209 90 ntBASIC4.11□□□□□ -1.75
Sh3rf1Q69ZI1 Gm22611-201ENSMUST00000158288 150 ntBASIC4.11□□□□□ -1.75
Sh3rf1Q69ZI1 Gm29428-201ENSMUST00000190086 409 ntBASIC4.11□□□□□ -1.75
Sh3rf1Q69ZI1 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Sh3rf1Q69ZI1 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC4.11□□□□□ -1.75
Sh3rf1Q69ZI1 Mir1a-2-201ENSMUST00000198520 72 ntBASIC4.11□□□□□ -1.75
Sh3rf1Q69ZI1 Gm44871-201ENSMUST00000207821 497 ntBASIC4.11□□□□□ -1.75
Sh3rf1Q69ZI1 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Sh3rf1Q69ZI1 AC098718.2-201ENSMUST00000226822 285 ntBASIC4.11□□□□□ -1.75
Sh3rf1Q69ZI1 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Sh3rf1Q69ZI1 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Sh3rf1Q69ZI1 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Sh3rf1Q69ZI1 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Sh3rf1Q69ZI1 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Sh3rf1Q69ZI1 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Sh3rf1Q69ZI1 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Sh3rf1Q69ZI1 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Gm25965-201ENSMUST00000157170 93 ntBASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Gm22654-201ENSMUST00000157874 105 ntBASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Gm22767-201ENSMUST00000158365 165 ntBASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Gm25999-201ENSMUST00000175398 133 ntBASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Gm28627-201ENSMUST00000186141 453 ntBASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Snord80-202ENSMUST00000199023 77 ntBASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Gm44032-201ENSMUST00000204841 166 ntBASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Gm44583-201ENSMUST00000207478 281 ntBASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Gm45778-201ENSMUST00000211959 153 ntBASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Gm46998-201ENSMUST00000221444 330 ntBASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 CT010506.3-201ENSMUST00000223699 410 ntBASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 CT025689.3-201ENSMUST00000223817 301 ntBASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Gm25814-201ENSMUST00000082754 107 ntBASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Gm24616-201ENSMUST00000083274 139 ntBASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Gm26121-201ENSMUST00000083364 162 ntBASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Sh3rf1Q69ZI1 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 Gm25420-201ENSMUST00000104216 127 ntBASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 Gm12617-201ENSMUST00000121268 381 ntBASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 Gm9003-201ENSMUST00000121810 482 ntBASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 Gm16218-201ENSMUST00000155424 388 ntBASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 Gm22606-201ENSMUST00000158290 103 ntBASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 Mir5710-201ENSMUST00000176884 69 ntBASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 Gm43978-201ENSMUST00000203491 451 ntBASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 Gm44657-201ENSMUST00000208568 450 ntBASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 CT009713.6-201ENSMUST00000223615 294 ntBASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 AC101945.3-201ENSMUST00000226568 153 ntBASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 Gm25411-201ENSMUST00000083760 151 ntBASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.09□□□□□ -1.75
Sh3rf1Q69ZI1 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms