Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm25897-201ENSMUST00000083709 107 ntBASIC1.48□□□□□ -2.17
Scn9aQ62205 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Scn9aQ62205 Gm15029-201ENSMUST00000119742 199 ntBASIC1.47□□□□□ -2.17
Scn9aQ62205 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.47□□□□□ -2.17
Scn9aQ62205 Gm22963-201ENSMUST00000157960 91 ntBASIC1.47□□□□□ -2.17
Scn9aQ62205 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC1.47□□□□□ -2.17
Scn9aQ62205 Mir3066-201ENSMUST00000175296 83 ntBASIC1.47□□□□□ -2.17
Scn9aQ62205 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Scn9aQ62205 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.47□□□□□ -2.17
Scn9aQ62205 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Scn9aQ62205 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Scn9aQ62205 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Scn9aQ62205 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Scn9aQ62205 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Scn9aQ62205 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC1.47□□□□□ -2.17
Scn9aQ62205 Gm6829-201ENSMUST00000119858 360 ntBASIC1.47□□□□□ -2.17
Scn9aQ62205 Gm14238-201ENSMUST00000120227 323 ntBASIC1.47□□□□□ -2.17
Scn9aQ62205 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.47□□□□□ -2.17
Scn9aQ62205 Gm24632-201ENSMUST00000122770 323 ntBASIC1.47□□□□□ -2.17
Scn9aQ62205 Gm25666-201ENSMUST00000157702 107 ntBASIC1.47□□□□□ -2.17
Scn9aQ62205 Gm24942-201ENSMUST00000158328 114 ntBASIC1.47□□□□□ -2.17
Scn9aQ62205 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Scn9aQ62205 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.47□□□□□ -2.17
Scn9aQ62205 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC1.47□□□□□ -2.17
Scn9aQ62205 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Scn9aQ62205 Gm7065-201ENSMUST00000222150 474 ntBASIC1.47□□□□□ -2.17
Scn9aQ62205 CT009764.1-201ENSMUST00000222260 483 ntBASIC1.47□□□□□ -2.17
Scn9aQ62205 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Scn9aQ62205 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Scn9aQ62205 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Scn9aQ62205 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Scn9aQ62205 Igkv13-87-201ENSMUST00000114214 286 ntBASIC1.46□□□□□ -2.18
Scn9aQ62205 Gm15381-201ENSMUST00000121501 1156 ntBASIC1.46□□□□□ -2.18
Scn9aQ62205 Gm9001-201ENSMUST00000121642 399 ntBASIC1.46□□□□□ -2.18
Scn9aQ62205 Gm22037-201ENSMUST00000157280 296 ntBASIC1.46□□□□□ -2.18
Scn9aQ62205 Gm17113-201ENSMUST00000170118 171 ntBASIC1.46□□□□□ -2.18
Scn9aQ62205 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
Scn9aQ62205 Gm27265-201ENSMUST00000183559 77 ntBASIC1.46□□□□□ -2.18
Scn9aQ62205 Gm28755-201ENSMUST00000185773 199 ntBASIC1.46□□□□□ -2.18
Scn9aQ62205 Gm37801-201ENSMUST00000194754 274 ntBASIC1.46□□□□□ -2.18
Scn9aQ62205 Trav12-4-201ENSMUST00000200663 271 ntBASIC1.46□□□□□ -2.18
Scn9aQ62205 Gm44088-201ENSMUST00000204595 237 ntBASIC1.46□□□□□ -2.18
Scn9aQ62205 Gm45263-201ENSMUST00000210377 1375 ntBASIC1.45□□□□□ -2.18
Scn9aQ62205 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC1.45□□□□□ -2.18
Scn9aQ62205 Gm13806-201ENSMUST00000117822 325 ntBASIC1.45□□□□□ -2.18
Scn9aQ62205 Gm23137-201ENSMUST00000157559 107 ntBASIC1.45□□□□□ -2.18
Scn9aQ62205 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.45□□□□□ -2.18
Scn9aQ62205 Gm18268-201ENSMUST00000208445 943 ntBASIC1.45□□□□□ -2.18
Scn9aQ62205 Gm35262-201ENSMUST00000215133 267 ntBASIC1.45□□□□□ -2.18
Scn9aQ62205 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC1.45□□□□□ -2.18
Scn9aQ62205 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.45□□□□□ -2.18
Scn9aQ62205 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Scn9aQ62205 Gm25047-201ENSMUST00000122667 104 ntBASIC1.45□□□□□ -2.18
Scn9aQ62205 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC1.45□□□□□ -2.18
Scn9aQ62205 Gm25026-201ENSMUST00000175017 188 ntBASIC1.45□□□□□ -2.18
Scn9aQ62205 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.45□□□□□ -2.18
Scn9aQ62205 Gm45438-201ENSMUST00000210242 564 ntBASIC1.45□□□□□ -2.18
Scn9aQ62205 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Scn9aQ62205 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Scn9aQ62205 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.45□□□□□ -2.18
Scn9aQ62205 Gm23247-201ENSMUST00000083373 107 ntBASIC1.45□□□□□ -2.18
Scn9aQ62205 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.45□□□□□ -2.18
Scn9aQ62205 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC1.44□□□□□ -2.18
Scn9aQ62205 Gm13731-201ENSMUST00000117332 196 ntBASIC1.44□□□□□ -2.18
Scn9aQ62205 Gm14918-201ENSMUST00000118153 268 ntBASIC1.44□□□□□ -2.18
Scn9aQ62205 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.44□□□□□ -2.18
Scn9aQ62205 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.44□□□□□ -2.18
Scn9aQ62205 Gm5317-201ENSMUST00000204445 847 ntBASIC1.44□□□□□ -2.18
Scn9aQ62205 Gm35558-202ENSMUST00000221819 499 ntBASIC1.44□□□□□ -2.18
Scn9aQ62205 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Scn9aQ62205 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Scn9aQ62205 Mir137-201ENSMUST00000083635 73 ntBASIC1.44□□□□□ -2.18
Scn9aQ62205 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.44□□□□□ -2.18
Scn9aQ62205 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.44□□□□□ -2.18
Scn9aQ62205 Gm45262-201ENSMUST00000209917 1463 ntBASIC1.43□□□□□ -2.18
Scn9aQ62205 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Scn9aQ62205 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
Scn9aQ62205 Gm12235-201ENSMUST00000118596 170 ntBASIC1.43□□□□□ -2.18
Scn9aQ62205 Mup-ps15-201ENSMUST00000121741 539 ntBASIC1.43□□□□□ -2.18
Scn9aQ62205 Gm24773-201ENSMUST00000158513 99 ntBASIC1.43□□□□□ -2.18
Scn9aQ62205 Gm23008-201ENSMUST00000158946 80 ntBASIC1.43□□□□□ -2.18
Scn9aQ62205 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC1.43□□□□□ -2.18
Scn9aQ62205 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.43□□□□□ -2.18
Scn9aQ62205 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.43□□□□□ -2.18
Scn9aQ62205 Gm45173-201ENSMUST00000206819 305 ntBASIC1.43□□□□□ -2.18
Scn9aQ62205 Gm45530-201ENSMUST00000211658 225 ntBASIC1.43□□□□□ -2.18
Scn9aQ62205 AC123803.1-201ENSMUST00000216093 189 ntBASIC1.43□□□□□ -2.18
Scn9aQ62205 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.43□□□□□ -2.18
Scn9aQ62205 Gm25787-201ENSMUST00000104709 92 ntBASIC1.43□□□□□ -2.18
Scn9aQ62205 Gm22960-201ENSMUST00000122517 104 ntBASIC1.43□□□□□ -2.18
Scn9aQ62205 Gm22769-201ENSMUST00000158367 98 ntBASIC1.43□□□□□ -2.18
Scn9aQ62205 Gm22693-201ENSMUST00000175049 442 ntBASIC1.43□□□□□ -2.18
Scn9aQ62205 Gm29011-201ENSMUST00000191059 712 ntBASIC1.43□□□□□ -2.18
Scn9aQ62205 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.43□□□□□ -2.18
Scn9aQ62205 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.43□□□□□ -2.18
Scn9aQ62205 AC172027.1-201ENSMUST00000217659 337 ntBASIC1.43□□□□□ -2.18
Scn9aQ62205 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.43□□□□□ -2.18
Scn9aQ62205 Gm6109-201ENSMUST00000223297 348 ntBASIC1.43□□□□□ -2.18
Scn9aQ62205 AL645546.2-201ENSMUST00000224526 265 ntBASIC1.43□□□□□ -2.18
Scn9aQ62205 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms