Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm44526-201ENSMUST00000204664 121 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm45382-201ENSMUST00000210607 151 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 AL929265.1-201ENSMUST00000213427 125 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm7692-201ENSMUST00000213534 409 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 AC112274.2-201ENSMUST00000218436 170 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 CT571268.1-201ENSMUST00000222320 407 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 n-R5s166-201ENSMUST00000082898 121 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
Trav3-3Q5R1C3 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
Trav3-3Q5R1C3 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.14
Trav3-3Q5R1C3 Gm37296-201ENSMUST00000192728 2922 ntBASIC1.65□□□□□ -2.14
Trav3-3Q5R1C3 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Gm24670-201ENSMUST00000104154 132 ntBASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Gm14007-201ENSMUST00000118288 210 ntBASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Gm14049-201ENSMUST00000121009 636 ntBASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Gm14821-201ENSMUST00000121975 435 ntBASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Mir1942-201ENSMUST00000157274 63 ntBASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Gm22597-201ENSMUST00000157602 80 ntBASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Gm22389-201ENSMUST00000158193 301 ntBASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Gm22633-201ENSMUST00000179834 107 ntBASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Gm11395-201ENSMUST00000181011 499 ntBASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Gm28466-201ENSMUST00000190678 659 ntBASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Gm18692-201ENSMUST00000193047 511 ntBASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Gm44938-201ENSMUST00000208614 427 ntBASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Gm45452-201ENSMUST00000210905 177 ntBASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Gm22249-201ENSMUST00000082485 136 ntBASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Gm24165-201ENSMUST00000082718 128 ntBASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Gm24921-201ENSMUST00000083024 107 ntBASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Gm45461-201ENSMUST00000211726 4535 ntBASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Trav3-3Q5R1C3 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm43032-201ENSMUST00000197967 3123 ntBASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm13378-201ENSMUST00000117483 336 ntBASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm15659-201ENSMUST00000118881 341 ntBASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm12646-201ENSMUST00000119144 238 ntBASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm15719-201ENSMUST00000120619 635 ntBASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm14709-201ENSMUST00000121225 304 ntBASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm12443-201ENSMUST00000122308 323 ntBASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm14713-201ENSMUST00000122362 686 ntBASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm13368-201ENSMUST00000122443 430 ntBASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm15692-201ENSMUST00000152173 352 ntBASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm22792-201ENSMUST00000157225 133 ntBASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm22367-201ENSMUST00000178930 132 ntBASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm10193-201ENSMUST00000188288 231 ntBASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm37946-201ENSMUST00000192064 347 ntBASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm42475-201ENSMUST00000201212 295 ntBASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm10297-201ENSMUST00000207136 651 ntBASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm29817-201ENSMUST00000210098 172 ntBASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trav3-3Q5R1C3 AC125374.3-201ENSMUST00000214983 2810 ntBASIC1.63□□□□□ -2.15
Trav3-3Q5R1C3 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC1.63□□□□□ -2.15
Trav3-3Q5R1C3 Gm24127-201ENSMUST00000104110 130 ntBASIC1.63□□□□□ -2.15
Trav3-3Q5R1C3 Gm22488-201ENSMUST00000116811 127 ntBASIC1.63□□□□□ -2.15
Trav3-3Q5R1C3 Gm13756-201ENSMUST00000117618 222 ntBASIC1.63□□□□□ -2.15
Trav3-3Q5R1C3 Gm23111-201ENSMUST00000122652 105 ntBASIC1.63□□□□□ -2.15
Trav3-3Q5R1C3 Gm24910-201ENSMUST00000157289 272 ntBASIC1.63□□□□□ -2.15
Trav3-3Q5R1C3 Gm24997-201ENSMUST00000157910 105 ntBASIC1.63□□□□□ -2.15
Trav3-3Q5R1C3 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Trav3-3Q5R1C3 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.63□□□□□ -2.15
Trav3-3Q5R1C3 Gm18396-201ENSMUST00000177095 361 ntBASIC1.63□□□□□ -2.15
Trav3-3Q5R1C3 Zfp950-206ENSMUST00000178819 171 ntBASIC1.63□□□□□ -2.15
Trav3-3Q5R1C3 Gm37438-201ENSMUST00000192813 393 ntBASIC1.63□□□□□ -2.15
Trav3-3Q5R1C3 Trbv18-201ENSMUST00000194256 294 ntBASIC1.63□□□□□ -2.15
Trav3-3Q5R1C3 Ighv1-32-201ENSMUST00000195149 351 ntBASIC1.63□□□□□ -2.15
Trav3-3Q5R1C3 Gm43810-201ENSMUST00000201018 232 ntBASIC1.63□□□□□ -2.15
Trav3-3Q5R1C3 Gm23517-201ENSMUST00000082830 192 ntBASIC1.63□□□□□ -2.15
Trav3-3Q5R1C3 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Trav3-3Q5R1C3 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Trav3-3Q5R1C3 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC1.63□□□□□ -2.15
Trav3-3Q5R1C3 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Gm19428-201ENSMUST00000220512 1995 ntBASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Gm26377-201ENSMUST00000102184 108 ntBASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Gm12102-201ENSMUST00000118251 604 ntBASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Gm11352-201ENSMUST00000119264 517 ntBASIC1.62□□□□□ -2.15
Trav3-3Q5R1C3 Gm14845-201ENSMUST00000121259 306 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms