Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm45240-201ENSMUST00000211437 674 ntBASIC2.06□□□□□ -2.08
Trav8d-2Q5R1B6 Gm18160-201ENSMUST00000214279 827 ntBASIC2.06□□□□□ -2.08
Trav8d-2Q5R1B6 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Trav8d-2Q5R1B6 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.06□□□□□ -2.08
Trav8d-2Q5R1B6 AC153646.1-201ENSMUST00000223229 1279 ntBASIC2.06□□□□□ -2.08
Trav8d-2Q5R1B6 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trav8d-2Q5R1B6 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.06□□□□□ -2.08
Trav8d-2Q5R1B6 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Gm24430-201ENSMUST00000104077 104 ntBASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Gm12096-201ENSMUST00000121149 829 ntBASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Gm9225-201ENSMUST00000121921 836 ntBASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Gm7209-201ENSMUST00000122339 333 ntBASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Gm22584-201ENSMUST00000177935 92 ntBASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Gm23568-201ENSMUST00000177960 92 ntBASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Gm24829-201ENSMUST00000179245 92 ntBASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Gm24464-201ENSMUST00000179697 107 ntBASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Gm27443-201ENSMUST00000184660 98 ntBASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Gm19193-201ENSMUST00000190263 590 ntBASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Gm43004-201ENSMUST00000201872 703 ntBASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 AC162931.1-201ENSMUST00000214184 267 ntBASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Gm18703-201ENSMUST00000215318 333 ntBASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Gm3442-201ENSMUST00000216808 710 ntBASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Gm22810-201ENSMUST00000082741 158 ntBASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trav8d-2Q5R1B6 Mir301b-201ENSMUST00000102333 97 ntBASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 Gm14823-201ENSMUST00000117698 238 ntBASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 Gm15659-201ENSMUST00000118881 341 ntBASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 Gm15029-201ENSMUST00000119742 199 ntBASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 Gm13356-201ENSMUST00000121678 335 ntBASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 Gm22236-201ENSMUST00000157093 106 ntBASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 Gm25413-201ENSMUST00000158544 312 ntBASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 Gm16326-201ENSMUST00000162843 414 ntBASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 Gm24713-201ENSMUST00000178850 107 ntBASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 Gm24638-201ENSMUST00000179807 132 ntBASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 Gm25448-201ENSMUST00000180065 107 ntBASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 Gm43810-201ENSMUST00000201018 232 ntBASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 Gm6030-201ENSMUST00000078768 402 ntBASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.04□□□□□ -2.08
Trav8d-2Q5R1B6 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Gm26147-201ENSMUST00000104479 114 ntBASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Gm26105-201ENSMUST00000157253 190 ntBASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Gm24784-201ENSMUST00000157640 62 ntBASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Gm18396-201ENSMUST00000177095 361 ntBASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Gm20794-201ENSMUST00000177626 628 ntBASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Gm21744-201ENSMUST00000178403 662 ntBASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Gm21171-201ENSMUST00000180048 673 ntBASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Gm29413-201ENSMUST00000186019 880 ntBASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Gm28700-201ENSMUST00000187614 579 ntBASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Gm29639-201ENSMUST00000188375 580 ntBASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Gm28843-201ENSMUST00000189198 678 ntBASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Gm29546-201ENSMUST00000191171 678 ntBASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Gm42647-201ENSMUST00000195939 459 ntBASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Gm44472-201ENSMUST00000204922 943 ntBASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 AC101677.1-201ENSMUST00000218590 158 ntBASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 AC192616.3-201ENSMUST00000220797 1124 ntBASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Gm23096-201ENSMUST00000083447 107 ntBASIC2.03□□□□□ -2.08
Trav8d-2Q5R1B6 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav8d-2Q5R1B6 Gm45872-201ENSMUST00000209804 1584 ntBASIC2.02□□□□□ -2.09
Trav8d-2Q5R1B6 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.02□□□□□ -2.09
Trav8d-2Q5R1B6 Gm22779-201ENSMUST00000104085 107 ntBASIC2.02□□□□□ -2.09
Trav8d-2Q5R1B6 Gm15497-201ENSMUST00000119137 551 ntBASIC2.02□□□□□ -2.09
Trav8d-2Q5R1B6 Gm16328-201ENSMUST00000126985 196 ntBASIC2.02□□□□□ -2.09
Trav8d-2Q5R1B6 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.02□□□□□ -2.09
Trav8d-2Q5R1B6 Gm25460-201ENSMUST00000157954 127 ntBASIC2.02□□□□□ -2.09
Trav8d-2Q5R1B6 Gm26173-201ENSMUST00000158416 136 ntBASIC2.02□□□□□ -2.09
Trav8d-2Q5R1B6 Gm24878-201ENSMUST00000158782 104 ntBASIC2.02□□□□□ -2.09
Trav8d-2Q5R1B6 Gm17062-201ENSMUST00000166987 461 ntBASIC2.02□□□□□ -2.09
Trav8d-2Q5R1B6 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms