Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm23002-201ENSMUST00000179221 107 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm22450-201ENSMUST00000179641 107 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm25024-201ENSMUST00000179667 104 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm25673-201ENSMUST00000179957 127 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm37300-201ENSMUST00000193327 280 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm18341-201ENSMUST00000197538 622 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm42578-201ENSMUST00000199960 194 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm19908-201ENSMUST00000204684 391 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm44030-201ENSMUST00000204865 432 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm45006-201ENSMUST00000206078 690 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm44519-201ENSMUST00000206486 122 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm17829-201ENSMUST00000219782 344 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm26071-201ENSMUST00000083261 107 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Mir32-201ENSMUST00000083610 70 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm24521-201ENSMUST00000083958 107 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 AC154634.4-201ENSMUST00000226077 2665 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Rnf43Q5NCP0 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Rnf43Q5NCP0 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Rnf43Q5NCP0 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.18□□□□□ -1.74
Rnf43Q5NCP0 Snord19-201ENSMUST00000104609 76 ntBASIC4.18□□□□□ -1.74
Rnf43Q5NCP0 Defa-ps5-201ENSMUST00000121541 279 ntBASIC4.18□□□□□ -1.74
Rnf43Q5NCP0 Gm11819-201ENSMUST00000122192 372 ntBASIC4.18□□□□□ -1.74
Rnf43Q5NCP0 Gm22654-201ENSMUST00000157874 105 ntBASIC4.18□□□□□ -1.74
Rnf43Q5NCP0 Gm23197-201ENSMUST00000158809 112 ntBASIC4.18□□□□□ -1.74
Rnf43Q5NCP0 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Rnf43Q5NCP0 Gm29610-201ENSMUST00000187749 453 ntBASIC4.18□□□□□ -1.74
Rnf43Q5NCP0 Gm37097-201ENSMUST00000193676 336 ntBASIC4.18□□□□□ -1.74
Rnf43Q5NCP0 Gm4644-201ENSMUST00000197587 400 ntBASIC4.18□□□□□ -1.74
Rnf43Q5NCP0 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC4.18□□□□□ -1.74
Rnf43Q5NCP0 Mir28a-201ENSMUST00000083560 86 ntBASIC4.18□□□□□ -1.74
Rnf43Q5NCP0 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Rnf43Q5NCP0 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Rnf43Q5NCP0 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 Gm24132-201ENSMUST00000104745 91 ntBASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 Gm14649-201ENSMUST00000121814 324 ntBASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 Gm24594-201ENSMUST00000122502 99 ntBASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 Gm14562-201ENSMUST00000129885 543 ntBASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 Gm23956-201ENSMUST00000157211 119 ntBASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 Gm23219-201ENSMUST00000158123 87 ntBASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 Gm22989-201ENSMUST00000158313 86 ntBASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 Gm29022-201ENSMUST00000190702 225 ntBASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 Gm43586-201ENSMUST00000195948 310 ntBASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 Gm42855-201ENSMUST00000197388 253 ntBASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 AC151902.2-201ENSMUST00000226419 301 ntBASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 Gm23443-201ENSMUST00000082916 128 ntBASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 Gm23042-201ENSMUST00000083866 101 ntBASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Rnf43Q5NCP0 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 Gm11065-201ENSMUST00000111462 228 ntBASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 Gm15896-201ENSMUST00000118045 440 ntBASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 Gm22315-201ENSMUST00000158010 143 ntBASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 Gm17100-201ENSMUST00000168963 272 ntBASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 Igkv9-128-201ENSMUST00000196602 353 ntBASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 Gm17887-201ENSMUST00000200194 547 ntBASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 Gm44657-201ENSMUST00000208568 450 ntBASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 AC155715.1-201ENSMUST00000213575 463 ntBASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 AC134577.1-201ENSMUST00000227572 295 ntBASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 Gm26457-201ENSMUST00000082678 78 ntBASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 Mir193a-201ENSMUST00000083461 66 ntBASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.16□□□□□ -1.74
Rnf43Q5NCP0 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
Rnf43Q5NCP0 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.15□□□□□ -1.74
Rnf43Q5NCP0 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Rnf43Q5NCP0 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Rnf43Q5NCP0 Gm24987-201ENSMUST00000104453 134 ntBASIC4.15□□□□□ -1.75
Rnf43Q5NCP0 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Rnf43Q5NCP0 Gm23640-201ENSMUST00000157860 104 ntBASIC4.15□□□□□ -1.75
Rnf43Q5NCP0 Gm24131-201ENSMUST00000158539 107 ntBASIC4.15□□□□□ -1.75
Rnf43Q5NCP0 Gm26291-201ENSMUST00000158889 137 ntBASIC4.15□□□□□ -1.75
Rnf43Q5NCP0 Mir6540-201ENSMUST00000184886 108 ntBASIC4.15□□□□□ -1.75
Rnf43Q5NCP0 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms