Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm23767-201ENSMUST00000179278 94 ntBASIC1.42□□□□□ -2.18
Spg11Q3UHA3 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.42□□□□□ -2.18
Spg11Q3UHA3 Gm29263-201ENSMUST00000188718 463 ntBASIC1.42□□□□□ -2.18
Spg11Q3UHA3 Gm28384-201ENSMUST00000189079 463 ntBASIC1.42□□□□□ -2.18
Spg11Q3UHA3 Gm43541-201ENSMUST00000197208 581 ntBASIC1.42□□□□□ -2.18
Spg11Q3UHA3 AC102575.1-201ENSMUST00000225348 547 ntBASIC1.42□□□□□ -2.18
Spg11Q3UHA3 AC125464.1-201ENSMUST00000228013 512 ntBASIC1.42□□□□□ -2.18
Spg11Q3UHA3 AC154532.2-201ENSMUST00000228947 598 ntBASIC1.42□□□□□ -2.18
Spg11Q3UHA3 Gm23723-201ENSMUST00000082996 132 ntBASIC1.42□□□□□ -2.18
Spg11Q3UHA3 Gm7123-201ENSMUST00000117647 213 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm12656-201ENSMUST00000118149 577 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm12102-201ENSMUST00000118251 604 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm14007-201ENSMUST00000118288 210 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm6664-201ENSMUST00000119138 468 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm15719-201ENSMUST00000120619 635 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm25102-201ENSMUST00000122479 112 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm22755-201ENSMUST00000157143 100 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm23435-201ENSMUST00000157183 156 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm22036-201ENSMUST00000157279 215 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm25341-201ENSMUST00000157461 268 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm17162-201ENSMUST00000168538 473 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm26435-201ENSMUST00000179026 107 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm27999-201ENSMUST00000183539 193 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm35212-201ENSMUST00000196672 606 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm18540-201ENSMUST00000204025 526 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC1.41□□□□□ -2.18
Spg11Q3UHA3 AC140254.1-201ENSMUST00000220063 331 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm23032-201ENSMUST00000157995 107 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm25375-201ENSMUST00000158157 135 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm22521-201ENSMUST00000158272 134 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm43680-201ENSMUST00000199466 340 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm45232-201ENSMUST00000207811 162 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm18729-201ENSMUST00000217230 621 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm9973-202ENSMUST00000220926 166 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm35558-202ENSMUST00000221819 499 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 AC161758.1-201ENSMUST00000226123 310 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 AC147545.1-201ENSMUST00000227528 108 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm24622-201ENSMUST00000082619 162 ntBASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Spg11Q3UHA3 Mir467h-201ENSMUST00000116759 121 ntBASIC1.4□□□□□ -2.18
Spg11Q3UHA3 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC1.4□□□□□ -2.18
Spg11Q3UHA3 Gm14913-201ENSMUST00000120011 1093 ntBASIC1.4□□□□□ -2.18
Spg11Q3UHA3 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC1.4□□□□□ -2.18
Spg11Q3UHA3 Gm24061-201ENSMUST00000157489 120 ntBASIC1.4□□□□□ -2.18
Spg11Q3UHA3 Gm24393-201ENSMUST00000158135 97 ntBASIC1.4□□□□□ -2.18
Spg11Q3UHA3 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
Spg11Q3UHA3 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
Spg11Q3UHA3 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC1.4□□□□□ -2.18
Spg11Q3UHA3 Gm27921-201ENSMUST00000183968 108 ntBASIC1.4□□□□□ -2.18
Spg11Q3UHA3 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC1.4□□□□□ -2.18
Spg11Q3UHA3 Gm45742-201ENSMUST00000212400 433 ntBASIC1.4□□□□□ -2.18
Spg11Q3UHA3 Gm23939-201ENSMUST00000082880 133 ntBASIC1.4□□□□□ -2.18
Spg11Q3UHA3 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC1.4□□□□□ -2.18
Spg11Q3UHA3 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Spg11Q3UHA3 Gm14558-201ENSMUST00000117458 381 ntBASIC1.4□□□□□ -2.19
Spg11Q3UHA3 Gm15177-201ENSMUST00000120491 577 ntBASIC1.4□□□□□ -2.19
Spg11Q3UHA3 Gm13356-201ENSMUST00000121678 335 ntBASIC1.4□□□□□ -2.19
Spg11Q3UHA3 Gm12045-201ENSMUST00000122122 573 ntBASIC1.4□□□□□ -2.19
Spg11Q3UHA3 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.4□□□□□ -2.19
Spg11Q3UHA3 Gm23278-201ENSMUST00000157911 143 ntBASIC1.4□□□□□ -2.19
Spg11Q3UHA3 Gm26406-201ENSMUST00000158503 124 ntBASIC1.4□□□□□ -2.19
Spg11Q3UHA3 Gm2966-201ENSMUST00000166052 481 ntBASIC1.4□□□□□ -2.19
Spg11Q3UHA3 Mir6405-201ENSMUST00000184584 124 ntBASIC1.4□□□□□ -2.19
Spg11Q3UHA3 Gm36974-201ENSMUST00000194200 1071 ntBASIC1.4□□□□□ -2.19
Spg11Q3UHA3 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC1.4□□□□□ -2.19
Spg11Q3UHA3 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC1.4□□□□□ -2.19
Spg11Q3UHA3 AC123656.2-201ENSMUST00000226726 227 ntBASIC1.4□□□□□ -2.19
Spg11Q3UHA3 AC158395.1-201ENSMUST00000227206 452 ntBASIC1.4□□□□□ -2.19
Spg11Q3UHA3 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Spg11Q3UHA3 Gm10038-201ENSMUST00000077233 441 ntBASIC1.4□□□□□ -2.19
Spg11Q3UHA3 Gm25008-201ENSMUST00000083809 81 ntBASIC1.4□□□□□ -2.19
Spg11Q3UHA3 Mir669f-201ENSMUST00000103850 121 ntBASIC1.39□□□□□ -2.19
Spg11Q3UHA3 Gm37743-201ENSMUST00000194645 376 ntBASIC1.39□□□□□ -2.19
Spg11Q3UHA3 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.39□□□□□ -2.19
Spg11Q3UHA3 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Spg11Q3UHA3 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.39□□□□□ -2.19
Spg11Q3UHA3 Gm43865-201ENSMUST00000204721 127 ntBASIC1.39□□□□□ -2.19
Spg11Q3UHA3 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Spg11Q3UHA3 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Spg11Q3UHA3 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.39□□□□□ -2.19
Spg11Q3UHA3 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
Spg11Q3UHA3 Gm44438-201ENSMUST00000204388 3236 ntBASIC1.39□□□□□ -2.19
Spg11Q3UHA3 Gm26377-201ENSMUST00000102184 108 ntBASIC1.39□□□□□ -2.19
Spg11Q3UHA3 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 147.4 ms