Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm3956-201ENSMUST00000164882 2560 ntBASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 Mir669g-201ENSMUST00000116809 123 ntBASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 Gm14821-201ENSMUST00000121975 435 ntBASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 n-R5s32-201ENSMUST00000122495 103 ntBASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 Gm22098-201ENSMUST00000157930 85 ntBASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 Gm26061-201ENSMUST00000175584 108 ntBASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 Gm21978-201ENSMUST00000179696 377 ntBASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 Mir6383-201ENSMUST00000184545 116 ntBASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 Mir6715-201ENSMUST00000184990 57 ntBASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 Gm43521-201ENSMUST00000197838 255 ntBASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 Gm43107-201ENSMUST00000198729 255 ntBASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 Gm44526-201ENSMUST00000204664 121 ntBASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 AC154521.1-201ENSMUST00000222635 330 ntBASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 AC121598.3-201ENSMUST00000227179 1643 ntBASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 Gm44925-201ENSMUST00000208879 2110 ntBASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 Gm37642-201ENSMUST00000193166 1735 ntBASIC4.01□□□□□ -1.77
Ddb1Q3U1J4 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Ddb1Q3U1J4 Gm18432-201ENSMUST00000195568 1451 ntBASIC4□□□□□ -1.77
Ddb1Q3U1J4 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Ddb1Q3U1J4 Gm24122-201ENSMUST00000104107 132 ntBASIC4□□□□□ -1.77
Ddb1Q3U1J4 Gm23214-201ENSMUST00000122716 157 ntBASIC4□□□□□ -1.77
Ddb1Q3U1J4 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC4□□□□□ -1.77
Ddb1Q3U1J4 Gm16218-201ENSMUST00000155424 388 ntBASIC4□□□□□ -1.77
Ddb1Q3U1J4 Gm26101-201ENSMUST00000157246 105 ntBASIC4□□□□□ -1.77
Ddb1Q3U1J4 Gm25392-201ENSMUST00000157335 297 ntBASIC4□□□□□ -1.77
Ddb1Q3U1J4 Gm22257-201ENSMUST00000158687 301 ntBASIC4□□□□□ -1.77
Ddb1Q3U1J4 Gm22664-201ENSMUST00000158719 105 ntBASIC4□□□□□ -1.77
Ddb1Q3U1J4 Gm27308-201ENSMUST00000184807 233 ntBASIC4□□□□□ -1.77
Ddb1Q3U1J4 Gm29352-201ENSMUST00000188054 544 ntBASIC4□□□□□ -1.77
Ddb1Q3U1J4 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC4□□□□□ -1.77
Ddb1Q3U1J4 Gm8242-202ENSMUST00000193056 475 ntBASIC4□□□□□ -1.77
Ddb1Q3U1J4 Gm44409-201ENSMUST00000198810 166 ntBASIC4□□□□□ -1.77
Ddb1Q3U1J4 AC166341.3-201ENSMUST00000221861 114 ntBASIC4□□□□□ -1.77
Ddb1Q3U1J4 AC125311.1-201ENSMUST00000226950 220 ntBASIC4□□□□□ -1.77
Ddb1Q3U1J4 Gm9818-201ENSMUST00000050900 255 ntBASIC4□□□□□ -1.77
Ddb1Q3U1J4 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Ddb1Q3U1J4 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ddb1Q3U1J4 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Ddb1Q3U1J4 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.99□□□□□ -1.77
Ddb1Q3U1J4 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.99□□□□□ -1.77
Ddb1Q3U1J4 Gm16354-201ENSMUST00000155376 150 ntBASIC3.99□□□□□ -1.77
Ddb1Q3U1J4 Gm22141-201ENSMUST00000157403 277 ntBASIC3.99□□□□□ -1.77
Ddb1Q3U1J4 Gm22216-201ENSMUST00000157557 114 ntBASIC3.99□□□□□ -1.77
Ddb1Q3U1J4 Gm22668-201ENSMUST00000158716 260 ntBASIC3.99□□□□□ -1.77
Ddb1Q3U1J4 Gm3027-201ENSMUST00000167579 451 ntBASIC3.99□□□□□ -1.77
Ddb1Q3U1J4 Gm25360-201ENSMUST00000178786 191 ntBASIC3.99□□□□□ -1.77
Ddb1Q3U1J4 Gm24264-201ENSMUST00000179835 94 ntBASIC3.99□□□□□ -1.77
Ddb1Q3U1J4 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ddb1Q3U1J4 Gm37616-201ENSMUST00000193974 322 ntBASIC3.99□□□□□ -1.77
Ddb1Q3U1J4 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.99□□□□□ -1.77
Ddb1Q3U1J4 AC167140.1-201ENSMUST00000224710 403 ntBASIC3.99□□□□□ -1.77
Ddb1Q3U1J4 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.99□□□□□ -1.77
Ddb1Q3U1J4 Gm22970-201ENSMUST00000083304 186 ntBASIC3.99□□□□□ -1.77
Ddb1Q3U1J4 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Ddb1Q3U1J4 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Ddb1Q3U1J4 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Ddb1Q3U1J4 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Ddb1Q3U1J4 Mir687-201ENSMUST00000102166 89 ntBASIC3.98□□□□□ -1.77
Ddb1Q3U1J4 Gm14119-201ENSMUST00000119511 235 ntBASIC3.98□□□□□ -1.77
Ddb1Q3U1J4 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC3.98□□□□□ -1.77
Ddb1Q3U1J4 Gm13409-201ENSMUST00000122072 546 ntBASIC3.98□□□□□ -1.77
Ddb1Q3U1J4 Gm14562-201ENSMUST00000129885 543 ntBASIC3.98□□□□□ -1.77
Ddb1Q3U1J4 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.98□□□□□ -1.77
Ddb1Q3U1J4 Gm24061-201ENSMUST00000157489 120 ntBASIC3.98□□□□□ -1.77
Ddb1Q3U1J4 Gm24191-201ENSMUST00000157977 122 ntBASIC3.98□□□□□ -1.77
Ddb1Q3U1J4 Gm24862-201ENSMUST00000179103 79 ntBASIC3.98□□□□□ -1.77
Ddb1Q3U1J4 Gm23310-201ENSMUST00000179105 79 ntBASIC3.98□□□□□ -1.77
Ddb1Q3U1J4 Gm25461-201ENSMUST00000179293 79 ntBASIC3.98□□□□□ -1.77
Ddb1Q3U1J4 Gm37586-201ENSMUST00000193654 204 ntBASIC3.98□□□□□ -1.77
Ddb1Q3U1J4 Gm43704-201ENSMUST00000196164 496 ntBASIC3.98□□□□□ -1.77
Ddb1Q3U1J4 Gm9379-201ENSMUST00000196790 646 ntBASIC3.98□□□□□ -1.77
Ddb1Q3U1J4 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.98□□□□□ -1.77
Ddb1Q3U1J4 AC130222.1-201ENSMUST00000221198 256 ntBASIC3.98□□□□□ -1.77
Ddb1Q3U1J4 AC239878.2-201ENSMUST00000224048 464 ntBASIC3.98□□□□□ -1.77
Ddb1Q3U1J4 Gm23136-201ENSMUST00000083425 99 ntBASIC3.98□□□□□ -1.77
Ddb1Q3U1J4 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Ddb1Q3U1J4 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ddb1Q3U1J4 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.97□□□□□ -1.77
Ddb1Q3U1J4 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.97□□□□□ -1.77
Ddb1Q3U1J4 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ddb1Q3U1J4 Snord98-201ENSMUST00000116819 65 ntBASIC3.97□□□□□ -1.77
Ddb1Q3U1J4 Gm25808-201ENSMUST00000122784 284 ntBASIC3.97□□□□□ -1.77
Ddb1Q3U1J4 Gm23000-201ENSMUST00000157083 139 ntBASIC3.97□□□□□ -1.77
Ddb1Q3U1J4 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ddb1Q3U1J4 Gm23977-201ENSMUST00000177871 74 ntBASIC3.97□□□□□ -1.77
Ddb1Q3U1J4 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ddb1Q3U1J4 Gm19620-201ENSMUST00000195972 434 ntBASIC3.97□□□□□ -1.77
Ddb1Q3U1J4 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 103.9 ms