Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
Col28a1Q2UY11 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Gm23256-201ENSMUST00000102235 110 ntBASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Gm26140-201ENSMUST00000103807 110 ntBASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Mir875-201ENSMUST00000104698 78 ntBASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Mir743b-201ENSMUST00000104751 77 ntBASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Gm14868-201ENSMUST00000117840 216 ntBASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC3.15□□□□□ -1.91
Col28a1Q2UY11 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Gm22908-201ENSMUST00000177620 110 ntBASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Mir6355-201ENSMUST00000183687 106 ntBASIC3.15□□□□□ -1.91
Col28a1Q2UY11 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Gm29665-201ENSMUST00000191457 528 ntBASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Gm37568-201ENSMUST00000191755 364 ntBASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Gm37732-201ENSMUST00000194377 316 ntBASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Gm19177-201ENSMUST00000204520 613 ntBASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Gm45207-201ENSMUST00000207469 145 ntBASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Gm45678-201ENSMUST00000210509 295 ntBASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC3.15□□□□□ -1.91
Col28a1Q2UY11 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Gm23055-201ENSMUST00000082805 94 ntBASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Gm25755-201ENSMUST00000083396 107 ntBASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Col28a1Q2UY11 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Col28a1Q2UY11 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 n-R5s202-201ENSMUST00000104517 114 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Gm24640-201ENSMUST00000116949 126 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Gm22626-201ENSMUST00000116990 126 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Gm14774-201ENSMUST00000117857 536 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Gm8880-201ENSMUST00000121800 454 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 n-R5s80-201ENSMUST00000122596 111 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Gm25624-201ENSMUST00000157222 275 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Gm24191-201ENSMUST00000157977 122 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Gm22769-201ENSMUST00000158367 98 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Gm23312-201ENSMUST00000158774 102 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Gm8114-201ENSMUST00000172225 484 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Gm24761-201ENSMUST00000179589 127 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Gm24488-201ENSMUST00000179934 127 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Gm25701-201ENSMUST00000179988 127 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Gm26431-201ENSMUST00000180199 127 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Gm27410-201ENSMUST00000183851 115 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Ighv12-2-201ENSMUST00000191949 362 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Gm44825-201ENSMUST00000207557 150 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Gm44598-201ENSMUST00000207566 150 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.14□□□□□ -1.91
Col28a1Q2UY11 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Col28a1Q2UY11 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC3.14□□□□□ -1.91
Col28a1Q2UY11 mt-Ti-201ENSMUST00000082393 69 ntBASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.14□□□□□ -1.91
Col28a1Q2UY11 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col28a1Q2UY11 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.13□□□□□ -1.91
Col28a1Q2UY11 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Col28a1Q2UY11 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col28a1Q2UY11 Mir592-201ENSMUST00000102113 96 ntBASIC3.13□□□□□ -1.91
Col28a1Q2UY11 Gm14811-201ENSMUST00000117070 117 ntBASIC3.13□□□□□ -1.91
Col28a1Q2UY11 Gm11490-201ENSMUST00000118128 272 ntBASIC3.13□□□□□ -1.91
Col28a1Q2UY11 Gm6274-201ENSMUST00000118173 797 ntBASIC3.13□□□□□ -1.91
Col28a1Q2UY11 Gm12902-201ENSMUST00000118389 322 ntBASIC3.13□□□□□ -1.91
Col28a1Q2UY11 Gm15807-201ENSMUST00000119880 1128 ntBASIC3.13□□□□□ -1.91
Col28a1Q2UY11 Gm12785-201ENSMUST00000122052 172 ntBASIC3.13□□□□□ -1.91
Col28a1Q2UY11 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.13□□□□□ -1.91
Col28a1Q2UY11 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.13□□□□□ -1.91
Col28a1Q2UY11 Gm24858-201ENSMUST00000158058 323 ntBASIC3.13□□□□□ -1.91
Col28a1Q2UY11 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.13□□□□□ -1.91
Col28a1Q2UY11 Gm27521-201ENSMUST00000184022 64 ntBASIC3.13□□□□□ -1.91
Col28a1Q2UY11 Gm7871-201ENSMUST00000195346 618 ntBASIC3.13□□□□□ -1.91
Col28a1Q2UY11 Gm42570-201ENSMUST00000195937 292 ntBASIC3.13□□□□□ -1.91
Col28a1Q2UY11 Igkv15-102-201ENSMUST00000197885 287 ntBASIC3.13□□□□□ -1.91
Col28a1Q2UY11 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC3.13□□□□□ -1.91
Col28a1Q2UY11 Gm45860-201ENSMUST00000212700 334 ntBASIC3.13□□□□□ -1.91
Col28a1Q2UY11 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Col28a1Q2UY11 AC165157.3-201ENSMUST00000220815 103 ntBASIC3.13□□□□□ -1.91
Col28a1Q2UY11 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Col28a1Q2UY11 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms