Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm28148-201ENSMUST00000186924 697 ntBASIC4.35□□□□□ -1.71
Col6a1Q04857 Gm20144-201ENSMUST00000203031 165 ntBASIC4.35□□□□□ -1.71
Col6a1Q04857 Gm32381-201ENSMUST00000203192 476 ntBASIC4.35□□□□□ -1.71
Col6a1Q04857 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC4.35□□□□□ -1.71
Col6a1Q04857 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Col6a1Q04857 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC4.35□□□□□ -1.71
Col6a1Q04857 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC4.35□□□□□ -1.71
Col6a1Q04857 Gm25200-201ENSMUST00000083094 130 ntBASIC4.35□□□□□ -1.71
Col6a1Q04857 Gm21035-201ENSMUST00000207867 2608 ntBASIC4.35□□□□□ -1.71
Col6a1Q04857 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Col6a1Q04857 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col6a1Q04857 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Col6a1Q04857 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Col6a1Q04857 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.34□□□□□ -1.71
Col6a1Q04857 Gm22936-201ENSMUST00000103955 126 ntBASIC4.34□□□□□ -1.71
Col6a1Q04857 Gm22984-201ENSMUST00000122751 122 ntBASIC4.34□□□□□ -1.71
Col6a1Q04857 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC4.34□□□□□ -1.71
Col6a1Q04857 Gm28020-201ENSMUST00000157739 67 ntBASIC4.34□□□□□ -1.71
Col6a1Q04857 Gm24676-201ENSMUST00000158758 75 ntBASIC4.34□□□□□ -1.71
Col6a1Q04857 Gm24666-201ENSMUST00000158937 167 ntBASIC4.34□□□□□ -1.71
Col6a1Q04857 Gm20542-201ENSMUST00000174582 372 ntBASIC4.34□□□□□ -1.71
Col6a1Q04857 Gm18520-201ENSMUST00000174783 658 ntBASIC4.34□□□□□ -1.71
Col6a1Q04857 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Col6a1Q04857 Mir7014-201ENSMUST00000183853 63 ntBASIC4.34□□□□□ -1.71
Col6a1Q04857 Gm28924-201ENSMUST00000190012 241 ntBASIC4.34□□□□□ -1.71
Col6a1Q04857 Gm17966-201ENSMUST00000193453 594 ntBASIC4.34□□□□□ -1.71
Col6a1Q04857 Gm43427-201ENSMUST00000198188 331 ntBASIC4.34□□□□□ -1.71
Col6a1Q04857 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC4.34□□□□□ -1.71
Col6a1Q04857 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.34□□□□□ -1.71
Col6a1Q04857 Gm45420-201ENSMUST00000211243 425 ntBASIC4.34□□□□□ -1.71
Col6a1Q04857 AC159896.1-201ENSMUST00000215264 215 ntBASIC4.34□□□□□ -1.71
Col6a1Q04857 Gm5175-202ENSMUST00000219699 529 ntBASIC4.34□□□□□ -1.71
Col6a1Q04857 Gm46993-201ENSMUST00000220708 259 ntBASIC4.34□□□□□ -1.71
Col6a1Q04857 AC101945.3-201ENSMUST00000226568 153 ntBASIC4.34□□□□□ -1.71
Col6a1Q04857 Gm24817-201ENSMUST00000093672 105 ntBASIC4.34□□□□□ -1.71
Col6a1Q04857 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Col6a1Q04857 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Col6a1Q04857 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Col6a1Q04857 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC4.34□□□□□ -1.72
Col6a1Q04857 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
Col6a1Q04857 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.33□□□□□ -1.72
Col6a1Q04857 Gm37868-201ENSMUST00000195578 2735 ntBASIC4.33□□□□□ -1.72
Col6a1Q04857 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col6a1Q04857 Gm8473-201ENSMUST00000176697 1885 ntBASIC4.33□□□□□ -1.72
Col6a1Q04857 Gm13873-201ENSMUST00000119208 427 ntBASIC4.33□□□□□ -1.72
Col6a1Q04857 Gm13581-201ENSMUST00000120675 278 ntBASIC4.33□□□□□ -1.72
Col6a1Q04857 Gm25438-201ENSMUST00000158281 110 ntBASIC4.33□□□□□ -1.72
Col6a1Q04857 Gm24106-201ENSMUST00000175498 127 ntBASIC4.33□□□□□ -1.72
Col6a1Q04857 Gm28453-203ENSMUST00000187041 189 ntBASIC4.33□□□□□ -1.72
Col6a1Q04857 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC4.33□□□□□ -1.72
Col6a1Q04857 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.33□□□□□ -1.72
Col6a1Q04857 Gm37001-201ENSMUST00000193377 190 ntBASIC4.33□□□□□ -1.72
Col6a1Q04857 Gm37997-201ENSMUST00000193515 267 ntBASIC4.33□□□□□ -1.72
Col6a1Q04857 Gm42647-201ENSMUST00000195939 459 ntBASIC4.33□□□□□ -1.72
Col6a1Q04857 Gm43217-201ENSMUST00000199513 367 ntBASIC4.33□□□□□ -1.72
Col6a1Q04857 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4.33□□□□□ -1.72
Col6a1Q04857 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a1Q04857 Gm25078-201ENSMUST00000082530 107 ntBASIC4.33□□□□□ -1.72
Col6a1Q04857 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.33□□□□□ -1.72
Col6a1Q04857 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.33□□□□□ -1.72
Col6a1Q04857 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Col6a1Q04857 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a1Q04857 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col6a1Q04857 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a1Q04857 Gm24067-201ENSMUST00000104514 85 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 Gm6574-201ENSMUST00000120037 362 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 Gm14810-201ENSMUST00000121628 486 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a1Q04857 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a1Q04857 Gm22036-201ENSMUST00000157279 215 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 Gm23326-201ENSMUST00000157419 105 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 Gm25720-201ENSMUST00000157503 105 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 Gm23219-201ENSMUST00000158123 87 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 Gm21893-201ENSMUST00000179119 397 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 Gm19503-201ENSMUST00000187109 241 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 Gm37343-201ENSMUST00000192542 111 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a1Q04857 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC4.32□□□□□ -1.72
Col6a1Q04857 Gm44010-201ENSMUST00000204432 331 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 Gm6240-201ENSMUST00000208014 473 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 AC164304.1-201ENSMUST00000226920 272 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a1Q04857 Gm22704-201ENSMUST00000083027 137 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 Gm25411-201ENSMUST00000083760 151 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
Col6a1Q04857 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col6a1Q04857 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
Col6a1Q04857 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.32□□□□□ -1.72
Col6a1Q04857 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a1Q04857 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col6a1Q04857 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a1Q04857 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.31□□□□□ -1.72
Col6a1Q04857 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms