Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.59□□□□□ -1.99
Gabpb1Q00420 Gm23862-201ENSMUST00000180342 94 ntBASIC2.59□□□□□ -1.99
Gabpb1Q00420 Gm5224-201ENSMUST00000183060 350 ntBASIC2.59□□□□□ -1.99
Gabpb1Q00420 Gm9022-202ENSMUST00000183285 483 ntBASIC2.59□□□□□ -1.99
Gabpb1Q00420 Mir6386-201ENSMUST00000183558 104 ntBASIC2.59□□□□□ -1.99
Gabpb1Q00420 Gm28343-201ENSMUST00000185386 112 ntBASIC2.59□□□□□ -1.99
Gabpb1Q00420 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Gabpb1Q00420 Gm38311-201ENSMUST00000192945 165 ntBASIC2.59□□□□□ -1.99
Gabpb1Q00420 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.59□□□□□ -1.99
Gabpb1Q00420 Gm8747-201ENSMUST00000195392 751 ntBASIC2.59□□□□□ -1.99
Gabpb1Q00420 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Gabpb1Q00420 AC192333.2-201ENSMUST00000224771 196 ntBASIC2.59□□□□□ -1.99
Gabpb1Q00420 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.59□□□□□ -1.99
Gabpb1Q00420 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.59□□□□□ -1.99
Gabpb1Q00420 Gm23097-201ENSMUST00000083448 105 ntBASIC2.59□□□□□ -1.99
Gabpb1Q00420 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Gabpb1Q00420 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.59□□□□□ -1.99
Gabpb1Q00420 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Gabpb1Q00420 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.59□□□□□ -2
Gabpb1Q00420 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Gabpb1Q00420 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gabpb1Q00420 Gm19428-201ENSMUST00000220512 1995 ntBASIC2.58□□□□□ -2
Gabpb1Q00420 Mir542-201ENSMUST00000102186 85 ntBASIC2.58□□□□□ -2
Gabpb1Q00420 Gm15986-201ENSMUST00000122153 400 ntBASIC2.58□□□□□ -2
Gabpb1Q00420 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.58□□□□□ -2
Gabpb1Q00420 Gm24436-201ENSMUST00000157889 302 ntBASIC2.58□□□□□ -2
Gabpb1Q00420 Gm23223-201ENSMUST00000158119 127 ntBASIC2.58□□□□□ -2
Gabpb1Q00420 Gm24551-201ENSMUST00000158645 92 ntBASIC2.58□□□□□ -2
Gabpb1Q00420 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.58□□□□□ -2
Gabpb1Q00420 Gm23933-201ENSMUST00000178405 79 ntBASIC2.58□□□□□ -2
Gabpb1Q00420 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC2.58□□□□□ -2
Gabpb1Q00420 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.58□□□□□ -2
Gabpb1Q00420 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC2.58□□□□□ -2
Gabpb1Q00420 Gm38238-201ENSMUST00000194334 346 ntBASIC2.58□□□□□ -2
Gabpb1Q00420 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.58□□□□□ -2
Gabpb1Q00420 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.58□□□□□ -2
Gabpb1Q00420 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.58□□□□□ -2
Gabpb1Q00420 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.58□□□□□ -2
Gabpb1Q00420 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.58□□□□□ -2
Gabpb1Q00420 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.58□□□□□ -2
Gabpb1Q00420 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.58□□□□□ -2
Gabpb1Q00420 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.58□□□□□ -2
Gabpb1Q00420 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gabpb1Q00420 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC2.58□□□□□ -2
Gabpb1Q00420 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC2.58□□□□□ -2
Gabpb1Q00420 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Gabpb1Q00420 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gabpb1Q00420 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Gabpb1Q00420 Gm23422-201ENSMUST00000102000 107 ntBASIC2.57□□□□□ -2
Gabpb1Q00420 Mir344c-201ENSMUST00000103919 92 ntBASIC2.57□□□□□ -2
Gabpb1Q00420 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.57□□□□□ -2
Gabpb1Q00420 Gm13876-201ENSMUST00000118451 261 ntBASIC2.57□□□□□ -2
Gabpb1Q00420 Gm25270-201ENSMUST00000122606 138 ntBASIC2.57□□□□□ -2
Gabpb1Q00420 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.57□□□□□ -2
Gabpb1Q00420 Gm25153-201ENSMUST00000157118 156 ntBASIC2.57□□□□□ -2
Gabpb1Q00420 Gm28647-201ENSMUST00000188416 197 ntBASIC2.57□□□□□ -2
Gabpb1Q00420 Gm29184-201ENSMUST00000190038 334 ntBASIC2.57□□□□□ -2
Gabpb1Q00420 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.57□□□□□ -2
Gabpb1Q00420 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.57□□□□□ -2
Gabpb1Q00420 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.57□□□□□ -2
Gabpb1Q00420 Gm26263-201ENSMUST00000083281 164 ntBASIC2.57□□□□□ -2
Gabpb1Q00420 Gm23247-201ENSMUST00000083373 107 ntBASIC2.57□□□□□ -2
Gabpb1Q00420 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Gabpb1Q00420 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC2.57□□□□□ -2
Gabpb1Q00420 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.57□□□□□ -2
Gabpb1Q00420 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC2.57□□□□□ -2
Gabpb1Q00420 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.57□□□□□ -2
Gabpb1Q00420 Gm22779-201ENSMUST00000104085 107 ntBASIC2.56□□□□□ -2
Gabpb1Q00420 Gm26473-201ENSMUST00000116763 127 ntBASIC2.56□□□□□ -2
Gabpb1Q00420 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.56□□□□□ -2
Gabpb1Q00420 Gm14852-201ENSMUST00000120065 647 ntBASIC2.56□□□□□ -2
Gabpb1Q00420 Gm22668-201ENSMUST00000158716 260 ntBASIC2.56□□□□□ -2
Gabpb1Q00420 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.56□□□□□ -2
Gabpb1Q00420 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.56□□□□□ -2
Gabpb1Q00420 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Gabpb1Q00420 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.56□□□□□ -2
Gabpb1Q00420 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Gabpb1Q00420 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.56□□□□□ -2
Gabpb1Q00420 Gm43264-201ENSMUST00000202284 325 ntBASIC2.56□□□□□ -2
Gabpb1Q00420 Gm44524-201ENSMUST00000203899 271 ntBASIC2.56□□□□□ -2
Gabpb1Q00420 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.56□□□□□ -2
Gabpb1Q00420 AC162387.1-201ENSMUST00000213369 213 ntBASIC2.56□□□□□ -2
Gabpb1Q00420 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.56□□□□□ -2
Gabpb1Q00420 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.56□□□□□ -2
Gabpb1Q00420 AC129208.2-201ENSMUST00000228506 320 ntBASIC2.56□□□□□ -2
Gabpb1Q00420 Gm9762-201ENSMUST00000036976 444 ntBASIC2.56□□□□□ -2
Gabpb1Q00420 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.56□□□□□ -2
Gabpb1Q00420 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.56□□□□□ -2
Gabpb1Q00420 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.56□□□□□ -2
Gabpb1Q00420 Gm26166-201ENSMUST00000083788 107 ntBASIC2.56□□□□□ -2
Gabpb1Q00420 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
Gabpb1Q00420 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Gabpb1Q00420 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Gabpb1Q00420 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Gabpb1Q00420 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Gabpb1Q00420 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Gabpb1Q00420 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.56□□□□□ -2
Gabpb1Q00420 Snora36b-201ENSMUST00000104383 132 ntBASIC2.55□□□□□ -2
Gabpb1Q00420 Gm26247-201ENSMUST00000116702 91 ntBASIC2.55□□□□□ -2
Gabpb1Q00420 Gm22486-201ENSMUST00000116815 137 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms